RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PALD1Q9ULE6 856 aa21.61■■□□□ 1.05
PNKP-230ENST00000638016 CENPFP49454 3210 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 PDHXO00330 501 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 TBC1D12O60347 775 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 CTNND1O60716 968 aaKnown RBP21.6■■□□□ 1.05
PNKP-230ENST00000638016 RAB11FIP3O75154 756 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 PKN2Q16513 984 aaKnown RBP21.6■■□□□ 1.05
PNKP-230ENST00000638016 SLFNL1Q499Z3 407 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 GPAT2Q6NUI2 795 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 ERO1AQ96HE7 468 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 ARHGAP39Q9C0H5 1083 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 CHMP4BQ9H444 224 aaKnown RBP21.6■■□□□ 1.05
PNKP-230ENST00000638016 AFG3L2Q9Y4W6 797 aa21.6■■□□□ 1.05
PNKP-230ENST00000638016 MYH1P12882 1939 aa21.59■■□□□ 1.05
PNKP-230ENST00000638016 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
PNKP-230ENST00000638016 GOLIM4O00461 696 aa21.59■■□□□ 1.05
PNKP-230ENST00000638016 CPA4Q9UI42 421 aa21.59■■□□□ 1.05
PNKP-230ENST00000638016 TLR2O60603 784 aa21.58■■□□□ 1.05
PNKP-230ENST00000638016 PLCG2P16885 1265 aa21.58■■□□□ 1.05
PNKP-230ENST00000638016 JAG1P78504 1218 aa21.58■■□□□ 1.05
PNKP-230ENST00000638016 ANKRD23Q86SG2 305 aa21.58■■□□□ 1.05
PNKP-230ENST00000638016 BOLA2Q9H3K6 86 aa21.58■■□□□ 1.05
PNKP-230ENST00000638016 ADGRA2Q96PE1 1338 aa21.57■■□□□ 1.04
PNKP-230ENST00000638016 A0A0G2JLL6 359 aaPredicted RBP21.57■■□□□ 1.04
PNKP-230ENST00000638016 CXCL11O14625 94 aa21.57■■□□□ 1.04
PNKP-230ENST00000638016 CHGBP05060 677 aa21.57■■□□□ 1.04
PNKP-230ENST00000638016 CYP2C8P10632 490 aa21.57■■□□□ 1.04
PNKP-230ENST00000638016 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
PNKP-230ENST00000638016 MAP3K12Q12852 859 aa21.57■■□□□ 1.04
PNKP-230ENST00000638016 GADL1Q6ZQY3 521 aa21.57■■□□□ 1.04
PNKP-230ENST00000638016 PRRT2Q7Z6L0 340 aaPredicted RBP21.57■■□□□ 1.04
PNKP-230ENST00000638016 EFCC1Q9HA90 598 aa21.57■■□□□ 1.04
PNKP-230ENST00000638016 ZCCHC17Q9NP64 241 aaKnown RBP21.57■■□□□ 1.04
PNKP-230ENST00000638016 PDE6AP16499 860 aa21.56■■□□□ 1.04
PNKP-230ENST00000638016 CTGFP29279 349 aa21.56■■□□□ 1.04
PNKP-230ENST00000638016 RGS19P49795 217 aa21.56■■□□□ 1.04
PNKP-230ENST00000638016 PI4KBQ9UBF8 816 aa21.56■■□□□ 1.04
PNKP-230ENST00000638016 DDX60LQ5H9U9 1706 aaKnown RBP21.55■■□□□ 1.04
PNKP-230ENST00000638016 CAP2P40123 477 aa21.55■■□□□ 1.04
PNKP-230ENST00000638016 EVX2Q03828 476 aa21.55■■□□□ 1.04
PNKP-230ENST00000638016 C17orf99Q6UX52 265 aa21.55■■□□□ 1.04
PNKP-230ENST00000638016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.55■■□□□ 1.04
PNKP-230ENST00000638016 RIOK1Q9BRS2 568 aaKnown RBP21.55■■□□□ 1.04
PNKP-230ENST00000638016 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
PNKP-230ENST00000638016 PTPN22Q9Y2R2 807 aa21.55■■□□□ 1.04
PNKP-230ENST00000638016 PCDHB15Q9Y5E8 787 aa21.55■■□□□ 1.04
PNKP-230ENST00000638016 NAV1Q8NEY1 1877 aa21.54■■□□□ 1.04
PNKP-230ENST00000638016 GDF11O95390 407 aa21.54■■□□□ 1.04
PNKP-230ENST00000638016 SLC9C2Q5TAH2 1124 aa21.54■■□□□ 1.04
PNKP-230ENST00000638016 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
PNKP-230ENST00000638016 DHX36Q9H2U1 1008 aaKnown RBP21.54■■□□□ 1.04
PNKP-230ENST00000638016 HERC5Q9UII4 1024 aaKnown RBP21.54■■□□□ 1.04
PNKP-230ENST00000638016 ZNF532Q9HCE3 1301 aa21.54■■□□□ 1.04
PNKP-230ENST00000638016 TCRBV5S4A2TA0A5A2 114 aa21.53■■□□□ 1.04
PNKP-230ENST00000638016 USP5P45974 858 aa21.53■■□□□ 1.04
PNKP-230ENST00000638016 LACTBP83111 547 aaPredicted RBP21.53■■□□□ 1.04
PNKP-230ENST00000638016 SPP2Q13103 211 aa21.53■■□□□ 1.04
PNKP-230ENST00000638016 TTF1Q15361 905 aaPredicted RBP21.53■■□□□ 1.04
PNKP-230ENST00000638016 TREML2Q5T2D2 321 aa21.53■■□□□ 1.04
PNKP-230ENST00000638016 PAG1Q9NWQ8 432 aa21.53■■□□□ 1.04
PNKP-230ENST00000638016 BRCA2P51587 3418 aa21.53■■□□□ 1.04
PNKP-230ENST00000638016 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
PNKP-230ENST00000638016 IGSF3O75054 1194 aa21.52■■□□□ 1.04
PNKP-230ENST00000638016 ATP5JP18859 108 aa21.52■■□□□ 1.04
PNKP-230ENST00000638016 MLLT1Q03111 559 aaPredicted RBP21.52■■□□□ 1.04
PNKP-230ENST00000638016 CRACR2BQ8N4Y2 399 aaPredicted RBP21.52■■□□□ 1.04
PNKP-230ENST00000638016 CRBNQ96SW2 442 aa21.52■■□□□ 1.04
PNKP-230ENST00000638016 PTCH2Q9Y6C5 1203 aa21.52■■□□□ 1.04
PNKP-230ENST00000638016 MYH7P12883 1935 aa21.52■■□□□ 1.04
PNKP-230ENST00000638016 MAGEB6P1A0A0J9YX57 407 aa21.51■■□□□ 1.03
PNKP-230ENST00000638016 METTL16Q86W50 562 aaKnown RBP21.51■■□□□ 1.03
PNKP-230ENST00000638016 LCORLQ8N3X6 602 aa21.51■■□□□ 1.03
PNKP-230ENST00000638016 PARK7Q99497 189 aaKnown RBP21.51■■□□□ 1.03
PNKP-230ENST00000638016 HAUS7Q99871 368 aa21.51■■□□□ 1.03
PNKP-230ENST00000638016 DCTPP1Q9H773 170 aa21.51■■□□□ 1.03
PNKP-230ENST00000638016 KIAA0100Q14667 2235 aaKnown RBP21.51■■□□□ 1.03
PNKP-230ENST00000638016 HMGCS2P54868 508 aa21.5■■□□□ 1.03
PNKP-230ENST00000638016 FASTKD5Q7L8L6 764 aaKnown RBP21.5■■□□□ 1.03
PNKP-230ENST00000638016 ZNF280CQ8ND82 737 aa21.5■■□□□ 1.03
PNKP-230ENST00000638016 SDR42E1Q8WUS8 393 aa21.5■■□□□ 1.03
PNKP-230ENST00000638016 HLA-DOAP06340 250 aa21.49■■□□□ 1.03
PNKP-230ENST00000638016 PLCD1P51178 756 aa21.49■■□□□ 1.03
PNKP-230ENST00000638016 FOXP4Q8IVH2 680 aaPredicted RBP21.49■■□□□ 1.03
PNKP-230ENST00000638016 TRIM34Q9BYJ4 488 aa21.49■■□□□ 1.03
PNKP-230ENST00000638016 ARMT1Q9H993 441 aa21.49■■□□□ 1.03
PNKP-230ENST00000638016 MGAMO43451 1857 aa21.48■■□□□ 1.03
PNKP-230ENST00000638016 USP17L5A8MUK1 530 aa21.48■■□□□ 1.03
PNKP-230ENST00000638016 BCRP11274 1271 aa21.48■■□□□ 1.03
PNKP-230ENST00000638016 ADD2P35612 726 aa21.48■■□□□ 1.03
PNKP-230ENST00000638016 TRIM47Q96LD4 638 aa21.48■■□□□ 1.03
PNKP-230ENST00000638016 ZBTB21Q9ULJ3 1066 aa21.48■■□□□ 1.03
PNKP-230ENST00000638016 AGTPBP1Q9UPW5 1226 aa21.48■■□□□ 1.03
PNKP-230ENST00000638016 BAZ2AQ9UIF9 1905 aaKnown RBP21.48■■□□□ 1.03
PNKP-230ENST00000638016 POTEFA5A3E0 1075 aa21.47■■□□□ 1.03
PNKP-230ENST00000638016 PRKAB2O43741 272 aa21.47■■□□□ 1.03
PNKP-230ENST00000638016 CYP2D6P10635 497 aa21.47■■□□□ 1.03
PNKP-230ENST00000638016 PSMC4P43686 418 aa21.47■■□□□ 1.03
PNKP-230ENST00000638016 MTMR2Q13614 643 aa21.47■■□□□ 1.03
PNKP-230ENST00000638016 OTUD7AQ8TE49 926 aaPredicted RBP21.47■■□□□ 1.03
PNKP-230ENST00000638016 SMIM22K7EJ46 135 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms