RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 MROH7-TTC4A0A0A0MT08 1334 aa14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 PDS5AQ29RF7 1337 aaKnown RBP14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 ANP32CO43423 234 aa14.56□□□□□ -0.08
SYNGAP1-223ENST00000637671 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
SYNGAP1-223ENST00000637671 HMGCS2P54868 508 aa14.56□□□□□ -0.08
SYNGAP1-223ENST00000637671 RASGRF1Q13972 1273 aa14.56□□□□□ -0.08
SYNGAP1-223ENST00000637671 Q7L0L9 218 aa14.56□□□□□ -0.08
SYNGAP1-223ENST00000637671 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
SYNGAP1-223ENST00000637671 PTPRFP10586 1907 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 MAP4K4O95819 1239 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 SLURP2P0DP57 97 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 ADORA1P30542 326 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 IRX3P78415 501 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 GSTO1P78417 241 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 ERICH6Q7L0X2 663 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 SOCS4Q8WXH5 440 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 ASCC2Q9H1I8 757 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 AS3MTQ9HBK9 375 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 GJD2Q9UKL4 321 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 OGDHLQ9ULD0 1010 aa14.55□□□□□ -0.08
SYNGAP1-223ENST00000637671 GPR75-ASB3A0A0A6YYF3 556 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 FAM196BA6NMK8 535 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 USP17L5A8MUK1 530 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 TRIM32Q13049 653 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 PDE3AQ14432 1141 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 TRMT44Q8IYL2 757 aaKnown RBP14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 TRIB2Q92519 343 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 NUDT12Q9BQG2 462 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 MTMR10Q9NXD2 777 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 TMOD4Q9NZQ9 345 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 MORF4L1Q9UBU8 362 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 PHIPQ8WWQ0 1821 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 ALPK3Q96L96 1907 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 MYH2Q9UKX2 1941 aa14.54□□□□□ -0.08
SYNGAP1-223ENST00000637671 DDX60LQ5H9U9 1706 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 COL2A1P02458 1487 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 LDHCP07864 332 aa14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 XRCC5P13010 732 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 ZKSCAN1P17029 563 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 CYP2B6P20813 491 aa14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 CAP2P40123 477 aa14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 RHBDL3P58872 404 aa14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 MECOMQ03112 1051 aa14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 MVPQ14764 893 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 CCAR1Q8IX12 1150 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
SYNGAP1-223ENST00000637671 LOC285556D6RIA3 1793 aa14.52□□□□□ -0.08
SYNGAP1-223ENST00000637671 SH3D19Q5HYK7 790 aa14.52□□□□□ -0.09
SYNGAP1-223ENST00000637671 MAP3K21Q5TCX8 1036 aa14.52□□□□□ -0.09
SYNGAP1-223ENST00000637671 GPRC5AQ8NFJ5 357 aa14.52□□□□□ -0.09
SYNGAP1-223ENST00000637671 HERC5Q9UII4 1024 aaKnown RBP14.52□□□□□ -0.09
SYNGAP1-223ENST00000637671 PA2G4Q9UQ80 394 aaKnown RBP14.52□□□□□ -0.09
SYNGAP1-223ENST00000637671 AKAP2Q9Y2D5 859 aa14.52□□□□□ -0.09
SYNGAP1-223ENST00000637671 PFASO15067 1338 aa14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 E9PSI1 815 aa14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 MAPK4P31152 587 aa14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 MTMR2Q13614 643 aa14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 ALDH1L2Q3SY69 923 aa14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 NOL10Q9BSC4 688 aaKnown RBP14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 COPRSQ9NQ92 184 aa14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 SMC4Q9NTJ3 1288 aa14.51□□□□□ -0.09
SYNGAP1-223ENST00000637671 ZNF521Q96K83 1311 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 DOCK3Q8IZD9 2030 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 A0A1B0GUL7 405 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 TIMM10P62072 90 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 GORABQ5T7V8 394 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 TEX11Q8IYF3 940 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 GTF3C2Q8WUA4 911 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 XAGE2Q96GT9 111 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 WDR18Q9BV38 432 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 CWC22Q9HCG8 908 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 RAI14Q9P0K7 980 aa14.5□□□□□ -0.09
SYNGAP1-223ENST00000637671 LAMA2P24043 3122 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 ASNSP08243 561 aa14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 COL6A1P12109 1028 aa14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 HOXA7P31268 230 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 RGS2P41220 211 aa14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 BACE1P56817 501 aa14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 HERVK_113P62684 666 aa14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 MDM2Q00987 491 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 NSUN4Q96CB9 384 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 P2RX7Q99572 595 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 LBHD1Q9BQE6 289 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 DHX36Q9H2U1 1008 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 PI4KBQ9UBF8 816 aa14.49□□□□□ -0.09
SYNGAP1-223ENST00000637671 C19orf81C9J6K1 198 aa14.48□□□□□ -0.09
SYNGAP1-223ENST00000637671 CACNB2Q08289 660 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-223ENST00000637671 FAM109BQ6ICB4 259 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-223ENST00000637671 SPATA5Q8NB90 893 aa14.48□□□□□ -0.09
SYNGAP1-223ENST00000637671 NEUROD6Q96NK8 337 aa14.48□□□□□ -0.09
SYNGAP1-223ENST00000637671 APBA2Q99767 749 aa14.48□□□□□ -0.09
SYNGAP1-223ENST00000637671 COL25A1Q9BXS0 654 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-223ENST00000637671 BAG3O95817 575 aa14.47□□□□□ -0.09
SYNGAP1-223ENST00000637671 ERVK-9P63128 1117 aa14.47□□□□□ -0.09
SYNGAP1-223ENST00000637671 ERVK-24P63145 666 aa14.47□□□□□ -0.09
SYNGAP1-223ENST00000637671 TFCP2Q12800 502 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms