RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 OSBP2Q969R2 916 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 CCDC102AQ96A19 550 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 ZFYP08048 801 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 TRIM29Q14134 588 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 NT5DC1Q5TFE4 455 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 RAB11FIP4Q86YS3 637 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 ALS2Q96Q42 1657 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 EIF3CLB5ME19 914 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 WHAMMP3Q1A5X7 153 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 ZNF569Q5MCW4 686 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 EIF3CQ99613 913 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 AFF2P51816 1311 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 A0A1B0GTH6 734 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 CTAGE15A4D2H0 777 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 N4BP1O75113 896 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 FGAP02671 866 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 CTAGE8P0CG41 777 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 ANTXR2P58335 489 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 CTAGE6Q86UF2 777 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 CTAGE4Q8IX94 777 aa17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNA1A-235ENST00000637004 ATG9AQ7Z3C6 839 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 ERCC5P28715 1186 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 TRDNQ13061 729 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 MORC3Q14149 939 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 WASHC4Q2M389 1173 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 RAD9BQ6WBX8 426 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 RASGRP2Q7LDG7 609 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 AIFM3Q96NN9 605 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 USP21Q9UK80 565 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 TTF2Q9UNY4 1162 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 CPDO75976 1380 aa17.71■□□□□ 0.43
CACNA1A-235ENST00000637004 ZNF213O14771 459 aa17.71■□□□□ 0.42
CACNA1A-235ENST00000637004 SARSP49591 514 aaKnown RBP17.71■□□□□ 0.42
CACNA1A-235ENST00000637004 CORO7P57737 925 aa17.71■□□□□ 0.42
CACNA1A-235ENST00000637004 JRKLQ9Y4A0 524 aa17.71■□□□□ 0.42
CACNA1A-235ENST00000637004 FOXN1O15353 648 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 RHOXF2BP0C7M4 288 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 VSNL1P62760 191 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 KANK3Q6NY19 840 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 RHOXF2Q9BQY4 288 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 BCCIPQ9P287 314 aaKnown RBP eCLIP17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 ANGEL1Q9UNK9 670 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 CASP7P55210 303 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 SLC39A6Q13433 755 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 CT47A1Q5JQC4 288 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 IGSF22Q8N9C0 903 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 NAPGQ99747 312 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 SUGCTQ9HAC7 445 aa17.7■□□□□ 0.42
CACNA1A-235ENST00000637004 PLCD1P51178 756 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 CCDC51Q96ER9 411 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 VIPAS39Q9H9C1 493 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 MYO1AQ9UBC5 1043 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 SRCAPQ6ZRS2 3230 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 A0A0G2JS52 829 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 ATP5J2-PTCD1G3V325 749 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 PTCD1O75127 700 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 MMP14P50281 582 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 FOXR1Q6PIV2 292 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 LRRC31Q6UY01 552 aa17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-235ENST00000637004 FOXP2O15409 715 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 RBL2Q08999 1139 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 WWC2Q6AWC2 1192 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 CNGA4Q8IV77 575 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 GEMIN8Q9NWZ8 242 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 SPEF2Q9C093 1822 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 WDR93Q6P2C0 686 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 TOM1L2Q6ZVM7 507 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 LRP10Q7Z4F1 713 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 PACS2Q86VP3 889 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 SLC35F6Q8N357 371 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 FAM204AQ9H8W3 233 aa17.68■□□□□ 0.42
CACNA1A-235ENST00000637004 FILIP1LQ4L180 1135 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 KCNG1Q9UIX4 513 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 EYA2O00167 538 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 POLR2DO15514 142 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 MFAP3LO75121 409 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 PHACTR2O75167 634 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 MCM3P25205 808 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 IARSP41252 1262 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 FOXO4P98177 505 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 EFCAB13Q8IY85 973 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 APPBP2Q92624 585 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms