RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TESPA1A2RU30 521 aaPredicted RBP13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 FAM196BA6NMK8 535 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TBC1D12O60347 775 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ADD2P35612 726 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PPIL2Q13356 520 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SCYL3Q8IZE3 742 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 DHX36Q9H2U1 1008 aaKnown RBP13.46□□□□□ -0.25
SRP54-AS1-205ENST00000636540 IRF6O14896 467 aa13.45□□□□□ -0.26
SRP54-AS1-205ENST00000636540 MX1P20591 662 aa13.45□□□□□ -0.26
SRP54-AS1-205ENST00000636540 INHBEP58166 350 aa13.45□□□□□ -0.26
SRP54-AS1-205ENST00000636540 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
SRP54-AS1-205ENST00000636540 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.26
SRP54-AS1-205ENST00000636540 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
SRP54-AS1-205ENST00000636540 HERC5Q9UII4 1024 aaKnown RBP13.45□□□□□ -0.26
SRP54-AS1-205ENST00000636540 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CHGBP05060 677 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 GTF2A2P52657 109 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 PPATQ06203 517 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 SLFNL1Q499Z3 407 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 METTL16Q86W50 562 aaKnown RBP13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 SMC5Q8IY18 1101 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 PTPN18Q99952 460 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 KCNH4Q9UQ05 1017 aa13.44□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CCL15-CCL14A0A0B4J2E2 113 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CTNND1O60716 968 aaKnown RBP13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ALDH1A1P00352 501 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 USP5P45974 858 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 SNAPC2Q13487 334 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 UBE3CQ15386 1083 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CCL15Q16663 113 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 PI4KBQ9UBF8 816 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 SAP30BPQ9UHR5 308 aaKnown RBP13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 PALD1Q9ULE6 856 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ZSWIM8A7E2V4 1837 aa13.43□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ERC2O15083 957 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 GLRX3O76003 335 aaKnown RBP13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 MBD4O95243 580 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 HLA-DOAP06340 250 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 PTPRAP18433 802 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ANKRD45Q5TZF3 282 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 EHD4Q9H223 541 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 RWDD1Q9H446 243 aaPredicted RBP13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 HTTP42858 3142 aa13.42□□□□□ -0.26
SRP54-AS1-205ENST00000636540 IGHDP01880 384 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CETPP11597 493 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 RRP1BQ14684 758 aaKnown RBP13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 SLC4A8Q2Y0W8 1093 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 R3HDMLQ9H3Y0 253 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ARMT1Q9H993 441 aa13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 GREB1LQ9C091 1923 aaPredicted RBP13.41□□□□□ -0.26
SRP54-AS1-205ENST00000636540 BTBD19C9JJ37 291 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 GPR25O00155 361 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CAP2P40123 477 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CRHR2Q13324 411 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 MOGSQ13724 837 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 CRACR2BQ8N4Y2 399 aaPredicted RBP13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 ZNF296Q8WUU4 475 aaPredicted RBP13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 LNPKQ9C0E8 428 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 PUS7LQ9H0K6 701 aaKnown RBP13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 DCP1AQ9NPI6 582 aaPredicted RBP13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 AFG3L2Q9Y4W6 797 aa13.4□□□□□ -0.26
SRP54-AS1-205ENST00000636540 A0A0G2JLL6 359 aaPredicted RBP13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 PDE1AP54750 535 aa13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 PRRT2Q7Z6L0 340 aaPredicted RBP13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 APPBP2Q92624 585 aa13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 SERPINB13Q9UIV8 391 aa13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 ADGRA2Q96PE1 1338 aa13.39□□□□□ -0.27
SRP54-AS1-205ENST00000636540 MGAMO43451 1857 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 CXCL11O14625 94 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 PRKAB2O43741 272 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 NUCB1Q02818 461 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 EVX2Q03828 476 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 GABPAQ06546 454 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 TAF1CQ15572 869 aaPredicted RBP13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 ANKRD23Q86SG2 305 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
SRP54-AS1-205ENST00000636540 CHD1LQ86WJ1 897 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms