RNA–Protein interactions for RNA: ENST00000636522.1

AMT-233, Transcript of aminomethyltransferase, human

TSL 2 BASIC

Gene AMT, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-233	ENST00000636522	LTBP3	Q9NS15	1303 aa		18.84	■□□□□ 0.61
AMT-233	ENST00000636522	USP17L3	A6NCW0	530 aa		18.83	■□□□□ 0.61
AMT-233	ENST00000636522	USP17L4	A6NCW7	530 aa		18.83	■□□□□ 0.61
AMT-233	ENST00000636522		F8W031	263 aa	Predicted RBP	18.83	■□□□□ 0.61
AMT-233	ENST00000636522	USP17L1	Q7RTZ2	530 aa		18.83	■□□□□ 0.61
AMT-233	ENST00000636522	CLSTN2	Q9H4D0	955 aa		18.83	■□□□□ 0.61
AMT-233	ENST00000636522	MRVI1	Q9Y6F6	885 aa		18.83	■□□□□ 0.61
AMT-233	ENST00000636522	SLC4A4	Q9Y6R1	1079 aa		18.83	■□□□□ 0.61
AMT-233	ENST00000636522	GAK	O14976	1311 aa		18.83	■□□□□ 0.6
AMT-233	ENST00000636522	AP5Z1	O43299	807 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	VPS33B	Q9H267	617 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.82	■□□□□ 0.6
AMT-233	ENST00000636522	ZMYM6	O95789	1325 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	PATL2	C9JE40	543 aa	Known RBP	18.82	■□□□□ 0.6
AMT-233	ENST00000636522	IGSF3	O75054	1194 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	HAND2	P61296	217 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	TMED8	Q6PL24	325 aa	Predicted RBP	18.82	■□□□□ 0.6
AMT-233	ENST00000636522	IFNL3	Q8IZI9	196 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	GTF3C6	Q969F1	213 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	ZNF830	Q96NB3	372 aa	Predicted RBP	18.82	■□□□□ 0.6
AMT-233	ENST00000636522	LLPH	Q9BRT6	129 aa	Known RBP	18.82	■□□□□ 0.6
AMT-233	ENST00000636522	ZMYND15	Q9H091	742 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	TTF2	Q9UNY4	1162 aa	Known RBP	18.82	■□□□□ 0.6
AMT-233	ENST00000636522	SUGT1	Q9Y2Z0	365 aa		18.82	■□□□□ 0.6
AMT-233	ENST00000636522	LIG1	P18858	919 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	SCNN1D	P51172	638 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	FKBP1A	P62942	108 aa	Known RBP	18.81	■□□□□ 0.6
AMT-233	ENST00000636522	GSTO1	P78417	241 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	ALX1	Q15699	326 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.81	■□□□□ 0.6
AMT-233	ENST00000636522	LEO1	Q8WVC0	666 aa	Predicted RBP	18.81	■□□□□ 0.6
AMT-233	ENST00000636522	SPATA32	Q96LK8	384 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	TNMD	Q9H2S6	317 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	KCNF1	Q9H3M0	494 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	DAGLA	Q9Y4D2	1042 aa		18.81	■□□□□ 0.6
AMT-233	ENST00000636522	GOLGA6L4	A6NEF3	574 aa		18.8	■□□□□ 0.6
AMT-233	ENST00000636522	RAD17	O75943	681 aa		18.8	■□□□□ 0.6
AMT-233	ENST00000636522	APP	P05067	770 aa		18.8	■□□□□ 0.6
AMT-233	ENST00000636522	KIAA0825	Q8IV33	1275 aa		18.8	■□□□□ 0.6
AMT-233	ENST00000636522	FAM163A	Q96GL9	167 aa	Predicted RBP	18.8	■□□□□ 0.6
AMT-233	ENST00000636522	PCDHAC2	Q9Y5I4	1007 aa		18.8	■□□□□ 0.6
AMT-233	ENST00000636522	GPR75-ASB3	A0A0A6YYF3	556 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	SMIM22	K7EJ46	135 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	PSMD14	O00487	310 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	GNAT2	P19087	354 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	BTD	P43251	543 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	REST	Q13127	1097 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	NIM1K	Q8IY84	436 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	CCDC94	Q9BW85	323 aa	Predicted RBP	18.79	■□□□□ 0.6
AMT-233	ENST00000636522	KIF3A	Q9Y496	699 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	TACC3	Q9Y6A5	838 aa		18.79	■□□□□ 0.6
AMT-233	ENST00000636522	HMGB1	P09429	215 aa	Known RBP	18.78	■□□□□ 0.6
AMT-233	ENST00000636522	YBX3	P16989	372 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
AMT-233	ENST00000636522	CDC25B	P30305	580 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	RHBDL3	P58872	404 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	PPP4C	P60510	307 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	EVX2	Q03828	476 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	ATL3	Q6DD88	541 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	TBC1D10C	Q8IV04	446 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	SMAP1	Q8IYB5	467 aa	Predicted RBP	18.78	■□□□□ 0.6
AMT-233	ENST00000636522	NKX2-3	Q8TAU0	364 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	CHMP4C	Q96CF2	233 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	NEK1	Q96PY6	1258 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	ZNRF3	Q9ULT6	936 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522		E7EWF7	191 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	PLA2G4D	Q86XP0	818 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	SMARCC2	Q8TAQ2	1214 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	NAPB	Q9H115	298 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	DACT1	Q9NYF0	836 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	CFAP45	Q9UL16	551 aa		18.78	■□□□□ 0.6
AMT-233	ENST00000636522	CTAGE5	O15320	804 aa		18.77	■□□□□ 0.6
AMT-233	ENST00000636522	LDHC	P07864	332 aa		18.77	■□□□□ 0.6
AMT-233	ENST00000636522	VIL1	P09327	827 aa	Known RBP	18.77	■□□□□ 0.6
AMT-233	ENST00000636522	CXCL9	Q07325	125 aa		18.77	■□□□□ 0.6
AMT-233	ENST00000636522	IMMT	Q16891	758 aa	Known RBP	18.77	■□□□□ 0.6
AMT-233	ENST00000636522	GML	Q99445	158 aa		18.77	■□□□□ 0.6
AMT-233	ENST00000636522	CBX8	Q9HC52	389 aa		18.77	■□□□□ 0.6
AMT-233	ENST00000636522	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.77	■□□□□ 0.6
AMT-233	ENST00000636522	MKRN1	Q9UHC7	482 aa	Known RBP	18.77	■□□□□ 0.6
AMT-233	ENST00000636522	CTNNA3	Q9UI47	895 aa		18.77	■□□□□ 0.6
AMT-233	ENST00000636522	PYCARD	Q9ULZ3	195 aa		18.77	■□□□□ 0.6
AMT-233	ENST00000636522	CYP2D7	A0A087X1C5	515 aa		18.76	■□□□□ 0.59
AMT-233	ENST00000636522	YY1	P25490	414 aa		18.76	■□□□□ 0.59
AMT-233	ENST00000636522	CRK	P46108	304 aa		18.76	■□□□□ 0.59
AMT-233	ENST00000636522	TDO2	P48775	406 aa		18.76	■□□□□ 0.59
AMT-233	ENST00000636522	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.76	■□□□□ 0.59
AMT-233	ENST00000636522	TCEANC2	Q96MN5	208 aa		18.76	■□□□□ 0.59
AMT-233	ENST00000636522	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.76	■□□□□ 0.59
AMT-233	ENST00000636522	ZNF75D	P51815	510 aa		18.75	■□□□□ 0.59
AMT-233	ENST00000636522	CTDSPL2	Q05D32	466 aa		18.75	■□□□□ 0.59
AMT-233	ENST00000636522	SYCP1	Q15431	976 aa		18.75	■□□□□ 0.59
AMT-233	ENST00000636522	HHIPL2	Q6UWX4	724 aa		18.75	■□□□□ 0.59
AMT-233	ENST00000636522	FERMT3	Q86UX7	667 aa		18.75	■□□□□ 0.59
AMT-233	ENST00000636522	INCENP	Q9NQS7	918 aa		18.75	■□□□□ 0.59
AMT-233	ENST00000636522	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.75	■□□□□ 0.59
AMT-233	ENST00000636522	POLR2A	P24928	1970 aa	Known RBP	18.75	■□□□□ 0.59
AMT-233	ENST00000636522	ZNF213	O14771	459 aa		18.74	■□□□□ 0.59
AMT-233	ENST00000636522	PFKFB2	O60825	505 aa		18.74	■□□□□ 0.59
AMT-233	ENST00000636522	BAG3	O95817	575 aa		18.74	■□□□□ 0.59
AMT-233	ENST00000636522	PLCB2	Q00722	1185 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms