RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 IGSF3O75054 1194 aa22.42■■□□□ 1.18
CLN6-214ENST00000636314 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
CLN6-214ENST00000636314 OSBPP22059 807 aa22.42■■□□□ 1.18
CLN6-214ENST00000636314 HOXD10P28358 340 aa22.42■■□□□ 1.18
CLN6-214ENST00000636314 SH3BP5LQ7L8J4 393 aa22.42■■□□□ 1.18
CLN6-214ENST00000636314 TEX11Q8IYF3 940 aa22.42■■□□□ 1.18
CLN6-214ENST00000636314 PIH1D3Q9NQM4 214 aaKnown RBP22.42■■□□□ 1.18
CLN6-214ENST00000636314 ZNF112Q9UJU3 913 aa22.42■■□□□ 1.18
CLN6-214ENST00000636314 CDK5RAP2Q96SN8 1893 aa22.41■■□□□ 1.18
CLN6-214ENST00000636314 MYPNQ86TC9 1320 aa22.41■■□□□ 1.18
CLN6-214ENST00000636314 DDTLA6NHG4 134 aaPredicted RBP22.41■■□□□ 1.18
CLN6-214ENST00000636314 NPM3O75607 178 aaKnown RBP22.41■■□□□ 1.18
CLN6-214ENST00000636314 BAG3O95817 575 aa22.41■■□□□ 1.18
CLN6-214ENST00000636314 BCL11AQ9H165 835 aa22.41■■□□□ 1.18
CLN6-214ENST00000636314 KCNH4Q9UQ05 1017 aa22.41■■□□□ 1.18
CLN6-214ENST00000636314 DOCK1Q14185 1865 aa22.41■■□□□ 1.18
CLN6-214ENST00000636314 COL2A1P02458 1487 aaPredicted RBP22.41■■□□□ 1.18
CLN6-214ENST00000636314 FOCADQ5VW36 1801 aa22.41■■□□□ 1.18
CLN6-214ENST00000636314 ADGRA2Q96PE1 1338 aa22.4■■□□□ 1.18
CLN6-214ENST00000636314 IDH1O75874 414 aaKnown RBP22.4■■□□□ 1.18
CLN6-214ENST00000636314 IFIT2P09913 472 aaKnown RBP22.4■■□□□ 1.18
CLN6-214ENST00000636314 PLCG2P16885 1265 aa22.4■■□□□ 1.18
CLN6-214ENST00000636314 GRK4P32298 578 aa22.4■■□□□ 1.18
CLN6-214ENST00000636314 NOL9Q5SY16 702 aaKnown RBP22.4■■□□□ 1.18
CLN6-214ENST00000636314 DPF3Q92784 378 aa22.4■■□□□ 1.18
CLN6-214ENST00000636314 SHISA4Q96DD7 197 aa22.4■■□□□ 1.18
CLN6-214ENST00000636314 AATFQ9NY61 560 aaKnown RBP eCLIP22.4■■□□□ 1.18
CLN6-214ENST00000636314 SH3RF3Q8TEJ3 882 aaPredicted RBP22.39■■□□□ 1.17
CLN6-214ENST00000636314 OSBPL5Q9H0X9 879 aaPredicted RBP22.39■■□□□ 1.17
CLN6-214ENST00000636314 BIN2Q9UBW5 565 aaPredicted RBP22.39■■□□□ 1.17
CLN6-214ENST00000636314 NDUFB9Q9Y6M9 179 aa22.39■■□□□ 1.17
CLN6-214ENST00000636314 ADGRA1Q86SQ6 560 aa22.38■■□□□ 1.17
CLN6-214ENST00000636314 PARK7Q99497 189 aaKnown RBP22.38■■□□□ 1.17
CLN6-214ENST00000636314 TRIOBPQ9H2D6 2365 aa22.38■■□□□ 1.17
CLN6-214ENST00000636314 PTPRFP10586 1907 aa22.37■■□□□ 1.17
CLN6-214ENST00000636314 MOGSQ13724 837 aa22.37■■□□□ 1.17
CLN6-214ENST00000636314 CHRDL2Q6WN34 429 aa22.37■■□□□ 1.17
CLN6-214ENST00000636314 NKX2-3Q8TAU0 364 aa22.37■■□□□ 1.17
CLN6-214ENST00000636314 PHF20L1A8MW92 1017 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 CYP2C8P10632 490 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 CCL5P13501 91 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 CYP7A1P22680 504 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 FCGRTP55899 365 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 RRP1P56182 461 aaKnown RBP22.36■■□□□ 1.17
CLN6-214ENST00000636314 PPP4CP60510 307 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 MAP3K12Q12852 859 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 SCYL3Q8IZE3 742 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 ANTXR1Q9H6X2 564 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 PICK1Q9NRD5 415 aa22.36■■□□□ 1.17
CLN6-214ENST00000636314 CXCL11O14625 94 aa22.35■■□□□ 1.17
CLN6-214ENST00000636314 UBXN2AP68543 259 aa22.35■■□□□ 1.17
CLN6-214ENST00000636314 MAP3K10Q02779 954 aa22.35■■□□□ 1.17
CLN6-214ENST00000636314 PRKCZQ05513 592 aa22.35■■□□□ 1.17
CLN6-214ENST00000636314 MAGEB6Q8N7X4 407 aa22.35■■□□□ 1.17
CLN6-214ENST00000636314 RNF208Q9H0X6 261 aa22.35■■□□□ 1.17
CLN6-214ENST00000636314 PHIPQ8WWQ0 1821 aa22.35■■□□□ 1.17
CLN6-214ENST00000636314 SIPA1L1O43166 1804 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 ATAD5Q96QE3 1844 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 SLURP2P0DP57 97 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 BCRP11274 1271 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 GJA8P48165 433 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 TTF1Q15361 905 aaPredicted RBP22.34■■□□□ 1.17
CLN6-214ENST00000636314 GPAT2Q6NUI2 795 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN6-214ENST00000636314 TGFBRAP1Q8WUH2 860 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 LRRCC1Q9C099 1032 aa22.34■■□□□ 1.17
CLN6-214ENST00000636314 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN6-214ENST00000636314 FLT1P17948 1338 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 FAM196BA6NMK8 535 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 TBC1D12O60347 775 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 CTNND1O60716 968 aaKnown RBP22.33■■□□□ 1.17
CLN6-214ENST00000636314 GJB1P08034 283 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 TMED8Q6PL24 325 aaPredicted RBP22.33■■□□□ 1.17
CLN6-214ENST00000636314 GADL1Q6ZQY3 521 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 CERS3Q8IU89 383 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 MAPKAPK5Q8IW41 473 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 DNAJC2Q99543 621 aaKnown RBP22.33■■□□□ 1.17
CLN6-214ENST00000636314 HTATIP2Q9BUP3 242 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 ZHX2Q9Y6X8 837 aa22.33■■□□□ 1.17
CLN6-214ENST00000636314 DYNLL1P63167 89 aaKnown RBP22.32■■□□□ 1.16
CLN6-214ENST00000636314 FASTKD5Q7L8L6 764 aaKnown RBP22.32■■□□□ 1.16
CLN6-214ENST00000636314 MIGA1Q8NAN2 632 aa22.32■■□□□ 1.16
CLN6-214ENST00000636314 SLAIN1Q8ND83 568 aa22.32■■□□□ 1.16
CLN6-214ENST00000636314 DHX36Q9H2U1 1008 aaKnown RBP22.32■■□□□ 1.16
CLN6-214ENST00000636314 GABRQQ9UN88 632 aa22.32■■□□□ 1.16
CLN6-214ENST00000636314 MYH1P12882 1939 aa22.31■■□□□ 1.16
CLN6-214ENST00000636314 GOLIM4O00461 696 aa22.31■■□□□ 1.16
CLN6-214ENST00000636314 PTPRAP18433 802 aa22.31■■□□□ 1.16
CLN6-214ENST00000636314 RBM27Q9P2N5 1060 aaKnown RBP22.31■■□□□ 1.16
CLN6-214ENST00000636314 HERC5Q9UII4 1024 aaKnown RBP22.31■■□□□ 1.16
CLN6-214ENST00000636314 A0A0G2JLL6 359 aaPredicted RBP22.3■■□□□ 1.16
CLN6-214ENST00000636314 PRRT2Q7Z6L0 340 aaPredicted RBP22.3■■□□□ 1.16
CLN6-214ENST00000636314 UNC93B1Q9H1C4 597 aa22.3■■□□□ 1.16
CLN6-214ENST00000636314 PI4KBQ9UBF8 816 aa22.3■■□□□ 1.16
CLN6-214ENST00000636314 SZT2Q5T011 3432 aa22.3■■□□□ 1.16
CLN6-214ENST00000636314 DOCK3Q8IZD9 2030 aa22.3■■□□□ 1.16
CLN6-214ENST00000636314 SMARCA5O60264 1052 aaPredicted RBP22.29■■□□□ 1.16
CLN6-214ENST00000636314 FARP2O94887 1054 aaPredicted RBP22.29■■□□□ 1.16
CLN6-214ENST00000636314 U2AF1L4Q8WU68 220 aaKnown RBP22.29■■□□□ 1.16
CLN6-214ENST00000636314 BOLA2Q9H3K6 86 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms