RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 SCRN1Q12765 414 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 MCM6Q14566 821 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 AOPEPQ8N6M6 819 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
CHD2-223ENST00000636306 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
CHD2-223ENST00000636306 FAM227BQ96M60 508 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 NEUROD6Q96NK8 337 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 NBPF3Q9H094 633 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 ALDH8A1Q9H2A2 487 aaPredicted RBP12.25□□□□□ -0.45
CHD2-223ENST00000636306 EPC1Q9H2F5 836 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 HELLSQ9NRZ9 838 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 CFAP45Q9UL16 551 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 FAM169AQ9Y6X4 670 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 SLC27A2O14975 620 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 CBFA2T2O43439 604 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 LIG3P49916 1009 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 PTH1RQ03431 593 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 WLSQ5T9L3 541 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 BLOC1S2Q6QNY1 142 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 CDC37L1Q7L3B6 337 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 XPO4Q9C0E2 1151 aaKnown RBP12.25□□□□□ -0.45
CHD2-223ENST00000636306 PAG1Q9NWQ8 432 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 MYH7P12883 1935 aa12.25□□□□□ -0.45
CHD2-223ENST00000636306 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 MYO1BO43795 1136 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 CSF1RP07333 972 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 ZFYP08048 801 aaPredicted RBP12.24□□□□□ -0.45
CHD2-223ENST00000636306 ICA1Q05084 483 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 XAGE2Q96GT9 111 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 FAM204AQ9H8W3 233 aa12.24□□□□□ -0.45
CHD2-223ENST00000636306 COL5A3P25940 1745 aaPredicted RBP12.24□□□□□ -0.45
CHD2-223ENST00000636306 ANKRD18BA2A2Z9 1011 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 A6NNZ2 444 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 FANCGO15287 622 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 FSBPO95073 299 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 HMGB1P09429 215 aaKnown RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 IFIT1P09914 478 aaKnown RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 CHMP4BP1P59074 171 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 ST3GAL1Q11201 340 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 GRIK3Q13003 919 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 CASP8Q14790 479 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 TUBB8Q3ZCM7 444 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 USPL1Q5W0Q7 1092 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 ATL3Q6DD88 541 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 CPLX2Q6PUV4 134 aaKnown RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 CCDC73Q6ZRK6 1079 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 CERKQ8TCT0 537 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 KIFC2Q96AC6 838 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 ANKZF1Q9H8Y5 726 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 IFNKQ9P0W0 207 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 PPP2R2CQ9Y2T4 447 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 ANKRD65E5RJM6 399 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 NEBLO76041 1014 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 CTSWP56202 376 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 GNG11P61952 73 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 ADCY2Q08462 1091 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 TTC39AQ5SRH9 613 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 ANKRD18AQ8IVF6 992 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 CCAR1Q8IX12 1150 aaKnown RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 JPH2Q9BR39 696 aaPredicted RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 ABCB6Q9NP58 842 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
CHD2-223ENST00000636306 TFIP11Q9UBB9 837 aaKnown RBP12.23□□□□□ -0.45
CHD2-223ENST00000636306 PDE8AO60658 829 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 KINO60870 393 aaKnown RBP12.22□□□□□ -0.45
CHD2-223ENST00000636306 CUTAO60888 179 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 N4BP1O75113 896 aaKnown RBP12.22□□□□□ -0.45
CHD2-223ENST00000636306 TAF5LO75529 589 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 PRPF6O94906 941 aaKnown RBP12.22□□□□□ -0.45
CHD2-223ENST00000636306 ADAMTS2O95450 1211 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 FNTAP49354 379 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 ME3Q16798 604 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 PARP10Q53GL7 1025 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 FBXW10Q5XX13 1052 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 FAM43BQ6ZT52 329 aaPredicted RBP12.22□□□□□ -0.45
CHD2-223ENST00000636306 B4GALNT4Q76KP1 1039 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 ZKSCAN4Q969J2 545 aaPredicted RBP12.22□□□□□ -0.45
CHD2-223ENST00000636306 SH3GL3Q99963 347 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 TRIM6Q9C030 488 aaPredicted RBP12.22□□□□□ -0.45
CHD2-223ENST00000636306 RCOR1Q9UKL0 485 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 ZBTB1Q9Y2K1 713 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
CHD2-223ENST00000636306 KAT6BQ8WYB5 2073 aa12.21□□□□□ -0.45
CHD2-223ENST00000636306 A0A1B0GUA9 196 aa12.21□□□□□ -0.45
CHD2-223ENST00000636306 SHTN1A0MZ66 631 aa12.21□□□□□ -0.45
CHD2-223ENST00000636306 RPS6KB1P23443 525 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms