RNA–Protein interactions for RNA: ENST00000636179.1

ZEB2-233, Transcript of zinc finger E-box binding homeobox 2, human

TSL 5

Gene ZEB2, Length 8,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-233	ENST00000636179	CAPRIN1	Q14444	709 aa	Known RBP	12.83	□□□□□ -0.36
ZEB2-233	ENST00000636179	ZKSCAN3	Q9BRR0	538 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	NDEL1	Q9GZM8	345 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	ESYT2	A0FGR8	921 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	DEAF1	O75398	565 aa	Predicted RBP	12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	CDKL2	Q92772	493 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	STX18	Q9P2W9	335 aa	Known RBP	12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	SRGAP3	O43295	1099 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	POLR3D	P05423	398 aa	Predicted RBP	12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179		A0A0B4J269	797 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	TUBB3	Q13509	450 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	GGT6	Q6P531	493 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	HDDC2	Q7Z4H3	204 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	CHD1L	Q86WJ1	897 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	PANK3	Q9H999	370 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	CABP5	Q9NP86	173 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	AMOTL2	Q9Y2J4	779 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	ATF3	P18847	181 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	PPARG	P37231	505 aa	Predicted RBP	12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	IGBP1	P78318	339 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	C16orf87	Q6PH81	154 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	PNMA8A	Q86V59	439 aa	Predicted RBP	12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	SEPT3	Q9UH03	358 aa		12.82	□□□□□ -0.36
ZEB2-233	ENST00000636179	DEFA1	P59665	94 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	DEFA3	P59666	94 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	ZC3H6	P61129	1189 aa	Known RBP	12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	STX1B	P61266	288 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	KLHL34	Q8N239	644 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	MTMR7	Q9Y216	660 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	DIXDC1	Q155Q3	683 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	SH3GL2	Q99962	352 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	SPG7	Q9UQ90	795 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	CHMP2B	Q9UQN3	213 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	KRT75	O95678	551 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	KRT7	P08729	469 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	RNF216	Q9NWF9	866 aa	Predicted RBP	12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	EIF2S1	P05198	315 aa	Known RBP	12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	FAM81B	Q96LP2	452 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	MMEL1	Q495T6	779 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	NLRP4	Q96MN2	994 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	CCDC88B	A6NC98	1476 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	ABCD1	P33897	745 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	PRDM10	Q9NQV6	1147 aa		12.81	□□□□□ -0.36
ZEB2-233	ENST00000636179	CCDC169	A6NNP5	214 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	MAP3K13	O43283	966 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	NR5A1	Q13285	461 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	NBPF20	Q3BBV1	942 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	NAPG	Q99747	312 aa	Predicted RBP	12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	DNAI1	Q9UI46	699 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	ABCC11	Q96J66	1382 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	RAB3GAP2	Q9H2M9	1393 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	ATG16L1	Q676U5	607 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	BACH2	Q9BYV9	841 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	EPB41	P11171	864 aa	Known RBP	12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	OLFM1	Q99784	485 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	CNOT10	Q9H9A5	744 aa	Known RBP	12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	ZNF213	O14771	459 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	ATP8B1	O43520	1251 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	ARHGAP44	Q17R89	818 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	TADA1	Q96BN2	335 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	GOLGA5	Q8TBA6	731 aa		12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	DBNL	Q9UJU6	430 aa	Known RBP	12.8	□□□□□ -0.36
ZEB2-233	ENST00000636179	STARD3NL	O95772	234 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	SRGAP2B	P0DMP2	458 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	SYT1	P21579	422 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	TSC22D1	Q15714	1073 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	PHF21A	Q96BD5	680 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	AKNA	Q7Z591	1439 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179		H0Y626	953 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	TRIM16	O95361	564 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	BCR	P11274	1271 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	NDUFA5	Q16718	116 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	VTI1A	Q96AJ9	217 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	CUEDC2	Q9H467	287 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	TRAF5	O00463	557 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	PLIN1	O60240	522 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	GNA11	P29992	359 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	IARS	P41252	1262 aa	Known RBP	12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	SH3GL3	Q99963	347 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	CAPN9	O14815	690 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	TNNC2	P02585	160 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	STX2	P32856	288 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	KLHL31	Q9H511	634 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	FAM95C	A0A1B0GW59	222 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	DNA2	P51530	1060 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	MRPS15	P82914	257 aa	Known RBP	12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	MPND	Q8N594	471 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	SAMM50	Q9Y512	469 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	PRR23D1	E9PI22	279 aa	Predicted RBP	12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	GNA14	O95837	355 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	PRR23D2	P0DMB1	279 aa	Predicted RBP	12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	SLC5A1	P13866	664 aa		12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	TRIM71	Q2Q1W2	868 aa	Known RBP	12.79	□□□□□ -0.36
ZEB2-233	ENST00000636179	MAP3K7	O43318	606 aa		12.78	□□□□□ -0.36
ZEB2-233	ENST00000636179	IDE	P14735	1019 aa		12.78	□□□□□ -0.36
ZEB2-233	ENST00000636179	PPP2R3A	Q06190	1150 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms