RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 ATP2B1P20020 1258 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
PSPC1-207ENST00000635251 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 HSP90AA4PQ58FG1 418 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 LCORLQ8N3X6 602 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 TACC3Q9Y6A5 838 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 MYH3P11055 1940 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 ECM29Q5VYK3 1845 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
PSPC1-207ENST00000635251 GOLGA8FQ08AF8 430 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 GOLGA8DPQ0D2H9 430 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 POSTNQ15063 836 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 RILPL1Q5EBL4 403 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 FBXO38Q6PIJ6 1188 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
PSPC1-207ENST00000635251 ZNF34Q8IZ26 560 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 CMTR1Q8N1G2 835 aaKnown RBP12.28□□□□□ -0.44
PSPC1-207ENST00000635251 MIGA1Q8NAN2 632 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 STAG1Q8WVM7 1258 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
PSPC1-207ENST00000635251 LRP2BPQ9P2M1 347 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 ABCA3Q99758 1704 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 BCL9O00512 1426 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 CCDC196A0A1B0GTZ2 297 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
PSPC1-207ENST00000635251 DEXIO95424 95 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 PDE4BQ07343 736 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 PDILTQ8N807 584 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 FOXP1Q9H334 677 aaPredicted RBP12.28□□□□□ -0.44
PSPC1-207ENST00000635251 L2HGDHQ9H9P8 463 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 SERTAD1Q9UHV2 236 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 DACH1Q9UI36 760 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
PSPC1-207ENST00000635251 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.44
PSPC1-207ENST00000635251 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.44
PSPC1-207ENST00000635251 TOB1P50616 345 aaPredicted RBP12.27□□□□□ -0.44
PSPC1-207ENST00000635251 BCAMP50895 628 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 GRIN1Q05586 938 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 SUSD4Q5VX71 490 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 TMTC2Q8N394 836 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 SMARCE1Q969G3 411 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 UBAC1Q9BSL1 405 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 RNF41Q9H4P4 317 aaPredicted RBP12.27□□□□□ -0.44
PSPC1-207ENST00000635251 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.44
PSPC1-207ENST00000635251 MAN1B1Q9UKM7 699 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 CEP131Q9UPN4 1083 aa12.27□□□□□ -0.44
PSPC1-207ENST00000635251 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.44
PSPC1-207ENST00000635251 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
PSPC1-207ENST00000635251 ZSCAN12O43309 604 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 IGSF3O75054 1194 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 PTPREP23469 700 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 ETF1P62495 437 aaKnown RBP12.27□□□□□ -0.45
PSPC1-207ENST00000635251 AKAP17AQ02040 695 aaKnown RBP12.27□□□□□ -0.45
PSPC1-207ENST00000635251 NR5A1Q13285 461 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 ERCC6LQ2NKX8 1250 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 AK7Q96M32 723 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 PCDHB6Q9Y5E3 794 aa12.27□□□□□ -0.45
PSPC1-207ENST00000635251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.27□□□□□ -0.45
PSPC1-207ENST00000635251 MINDY4BA8MYZ0 360 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 EXOC5O00471 708 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 BMP6P22004 513 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
PSPC1-207ENST00000635251 ELOA2Q8IYF1 753 aaPredicted RBP12.26□□□□□ -0.45
PSPC1-207ENST00000635251 ZNF654Q8IZM8 581 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 KRT222Q8N1A0 295 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 CRACR2BQ8N4Y2 399 aaPredicted RBP12.26□□□□□ -0.45
PSPC1-207ENST00000635251 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 NID2Q14112 1375 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 ITGB4P16144 1822 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 PHLPP2Q6ZVD8 1323 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 CYP7A1P22680 504 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 PPARAQ07869 468 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 CCDC152Q4G0S7 254 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 CCDC93Q567U6 631 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 GRAMD1CQ8IYS0 662 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
PSPC1-207ENST00000635251 MLKLQ8NB16 471 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 TMX1Q9H3N1 280 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 CABP5Q9NP86 173 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 NFE2L3Q9Y4A8 694 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 NUP98P52948 1817 aa12.26□□□□□ -0.45
PSPC1-207ENST00000635251 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 URI1O94763 535 aaPredicted RBP12.25□□□□□ -0.45
PSPC1-207ENST00000635251 XBP1P17861 261 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 FCHSD1Q86WN1 690 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 TRMT44Q8IYL2 757 aaKnown RBP12.25□□□□□ -0.45
PSPC1-207ENST00000635251 MNS1Q8NEH6 495 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 OXER1Q8TDS5 423 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 IQSEC3Q9UPP2 1182 aaPredicted RBP12.25□□□□□ -0.45
PSPC1-207ENST00000635251 LRP5O75197 1615 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 KANK3Q6NY19 840 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 ZNF771Q7L3S4 317 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms