RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 VEZTQ9HBM0 779 aa16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 ADARB2Q9NS39 739 aaKnown RBP16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 HACL1Q9UJ83 578 aa16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 UTRNP46939 3433 aa16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 ORC4O43929 436 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 PRDM1O75626 825 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 BLOC1S2Q6QNY1 142 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 MFSD6Q6ZSS7 791 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 C16orf86Q6ZW13 317 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 FAM83AQ86UY5 434 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 METTL16Q86W50 562 aaKnown RBP16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 TEPSINQ96N21 525 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 TMEM39BQ9GZU3 492 aa16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
PHACTR4-209ENST00000633371 PSMA5P28066 241 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 CDK8P49336 464 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 DHX32Q7L7V1 743 aaKnown RBP16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 NCOA7Q8NI08 942 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 SNX21Q969T3 373 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 LRRC2Q9BYS8 371 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 ZSWIM5Q9P217 1185 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
PHACTR4-209ENST00000633371 MYO1BO43795 1136 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 KDM4AO75164 1064 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 RASA1P20936 1047 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 SHMT1P34896 483 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 RASA3Q14644 834 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 ANGEL2Q5VTE6 544 aaKnown RBP16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 AGXT2Q9BYV1 514 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 TBC1D2Q9BYX2 928 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 EHD4Q9H223 541 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 DHX36Q9H2U1 1008 aaKnown RBP16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 TAF1DQ9H5J8 278 aaPredicted RBP16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
PHACTR4-209ENST00000633371 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 EPHX2P34913 555 aa16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 AK2P54819 239 aa16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 RRP1BQ14684 758 aaKnown RBP16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 LARP6Q9BRS8 491 aaKnown RBP16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 RNF41Q9H4P4 317 aaPredicted RBP16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 SENP2Q9HC62 589 aa16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 GGA3Q9NZ52 723 aa16.81■□□□□ 0.28
PHACTR4-209ENST00000633371 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 PRC1O43663 620 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 MAP3K10Q02779 954 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 FAM47AQ5JRC9 791 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 DLK2Q6UY11 383 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 Q6ZUG5 572 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 IGDCC4Q8TDY8 1250 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 KRT23Q9C075 422 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 PI4KBQ9UBF8 816 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 SERPINB13Q9UIV8 391 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 ATAD5Q96QE3 1844 aa16.8■□□□□ 0.28
PHACTR4-209ENST00000633371 MCM5P33992 734 aa16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 JAG1P78504 1218 aa16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 PDE4BQ07343 736 aa16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 SEC23AQ15436 765 aa16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 USP50Q70EL3 339 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 RALYLQ86SE5 291 aaKnown RBP16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 ZSCAN29Q8IWY8 852 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 AMOTL1Q8IY63 956 aa16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 FBXL16Q8N461 479 aa16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 DEFB129Q9H1M3 183 aa16.79■□□□□ 0.28
PHACTR4-209ENST00000633371 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 LARGE1O95461 756 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 SLC3A2P08195 630 aaKnown RBP16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 POTEIP0CG38 1075 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 POTEJP0CG39 1038 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 ANP32AP39687 249 aaKnown RBP16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 TRDNQ13061 729 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 PRAMEF18Q5VWM3 479 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 APOBEC3FQ8IUX4 373 aaKnown RBP16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 CSRNP1Q96S65 589 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 ZKSCAN3Q9BRR0 538 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 IL17RBQ9NRM6 502 aa16.78■□□□□ 0.28
PHACTR4-209ENST00000633371 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
PHACTR4-209ENST00000633371 RANBP6O60518 1105 aaKnown RBP16.77■□□□□ 0.28
PHACTR4-209ENST00000633371 NMT2O60551 498 aa16.77■□□□□ 0.28
PHACTR4-209ENST00000633371 AKR1B1P15121 316 aa16.77■□□□□ 0.28
PHACTR4-209ENST00000633371 SLC4A3P48751 1232 aa16.77■□□□□ 0.28
PHACTR4-209ENST00000633371 TNNI2P48788 182 aa16.77■□□□□ 0.28
PHACTR4-209ENST00000633371 TFAP4Q01664 338 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms