RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 HINFPQ9BQA5 517 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 YIPF4Q9BSR8 244 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 DHX36Q9H2U1 1008 aaKnown RBP5.74□□□□□ -1.49
SDCBP-213ENST00000630925 ALG13Q9NP73 1137 aaKnown RBP5.74□□□□□ -1.49
SDCBP-213ENST00000630925 PNMA8BQ9ULN7 279 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-213ENST00000630925 PHTF1Q9UMS5 762 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 TMX2Q9Y320 296 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 PCDHGA10Q9Y5H3 936 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 MAGED1Q9Y5V3 778 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-213ENST00000630925 SNX5Q9Y5X3 404 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 PHLDB1Q86UU1 1377 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 ABCA5Q8WWZ7 1642 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 TEX14Q8IWB6 1497 aa5.74□□□□□ -1.49
SDCBP-213ENST00000630925 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 TMCC2O75069 709 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 SETSIPP0DME0 302 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 ZSCAN20P17040 1043 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 TRPC1P48995 793 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 USP46P62068 366 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 GTF2IP78347 998 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 GOLGA2Q08379 1002 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 TAF1CQ15572 869 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 TUBB8Q3ZCM7 444 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 COBLL1Q53SF7 1204 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 PERM1Q5SV97 790 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 USPL1Q5W0Q7 1092 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 CXorf57Q6NSI4 855 aaKnown RBP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 FAM180BQ6P0A1 224 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 XRRA1Q6P2D8 792 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 C16orf87Q6PH81 154 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 CPLX2Q6PUV4 134 aaKnown RBP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 GALNT5Q7Z7M9 940 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 TEX9Q8N6V9 391 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 MTMR8Q96EF0 704 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 ST7Q9NRC1 585 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 COMMD8Q9NX08 183 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 ERBB4Q15303 1308 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 ASXL2Q76L83 1435 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 BCORL1Q5H9F3 1711 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 ABHD14A-ACY1A0A1B0GW23 586 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 IQCA1LA6NCM1 817 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 PLA2G4AP47712 749 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 PPP2R5BQ15173 497 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 SAFBQ15424 915 aaKnown RBP eCLIP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 RTL10Q7L3V2 364 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 RASGRP2Q7LDG7 609 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 NECAB2Q7Z6G3 386 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 STRA8Q7Z7C7 330 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 ITFG2Q969R8 447 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 SNX21Q969T3 373 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 EAF1Q96JC9 268 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 PRKRIP1Q9H875 184 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 KIAA1586Q9HCI6 787 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 BLOC1S4Q9NUP1 217 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 TBK1Q9UHD2 729 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 MAPK8IP1Q9UQF2 711 aa5.73□□□□□ -1.49
SDCBP-213ENST00000630925 LUC7L2Q9Y383 392 aaKnown RBP5.73□□□□□ -1.49
SDCBP-213ENST00000630925 STRCQ7RTU9 1775 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 COQ9O75208 318 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 CNOT4O95628 575 aaKnown RBP5.72□□□□□ -1.49
SDCBP-213ENST00000630925 RAD52P43351 418 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 CCT5P48643 541 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 PKN2Q16513 984 aaKnown RBP5.72□□□□□ -1.49
SDCBP-213ENST00000630925 PARP10Q53GL7 1025 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 ZC3H12BQ5HYM0 836 aaKnown RBP5.72□□□□□ -1.49
SDCBP-213ENST00000630925 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 C1orf53Q5VUE5 145 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 KIAA0319Q5VV43 1072 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 WWC2Q6AWC2 1192 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 HIBCHQ6NVY1 386 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-213ENST00000630925 LDHAL6AQ6ZMR3 332 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 DAAM2Q86T65 1068 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 ZBTB46Q86UZ6 589 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 RIN3Q8TB24 985 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 SHDQ96IW2 340 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 PPM1MQ96MI6 270 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 TRIM8Q9BZR9 551 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 SAP130Q9H0E3 1048 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 KLHL11Q9NVR0 708 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 KDM2BQ8NHM5 1336 aa5.72□□□□□ -1.49
SDCBP-213ENST00000630925 A0A1B0GVC2 190 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 TMEM110-MUSTN1A8MSY1 372 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 ESPNB1AK53 854 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 OPLAHO14841 1288 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 KIF5BP33176 963 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 GJA9P57773 515 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 GBX1Q14549 363 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 MTERF2Q49AM1 385 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 HSP90B2PQ58FF3 399 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 NFXL1Q6ZNB6 911 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 MILR1Q7Z6M3 343 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 TPH2Q8IWU9 490 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 GJD3Q8N144 294 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 FAM169BQ8N8A8 192 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 ARL10Q8N8L6 244 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 TSEN2Q8NCE0 465 aaKnown RBP5.71□□□□□ -1.49
SDCBP-213ENST00000630925 KIFC2Q96AC6 838 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 THAP11Q96EK4 314 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 KCNH8Q96L42 1107 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms