RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 CCL14Q16627 93 aa14.97□□□□□ -0.01
CHD2-218ENST00000629346 SLC4A10Q6U841 1118 aa14.97□□□□□ -0.01
CHD2-218ENST00000629346 USP38Q8NB14 1042 aa14.97□□□□□ -0.01
CHD2-218ENST00000629346 KLHDC4Q8TBB5 520 aa14.97□□□□□ -0.01
CHD2-218ENST00000629346 KAZALD1Q96I82 304 aa14.97□□□□□ -0.01
CHD2-218ENST00000629346 PHIPQ8WWQ0 1821 aa14.96□□□□□ -0.01
CHD2-218ENST00000629346 DOCK2Q92608 1830 aa14.96□□□□□ -0.01
CHD2-218ENST00000629346 FAM196BA6NMK8 535 aa14.96□□□□□ -0.01
CHD2-218ENST00000629346 XRCC5P13010 732 aaKnown RBP14.96□□□□□ -0.01
CHD2-218ENST00000629346 MAP3K10Q02779 954 aa14.96□□□□□ -0.01
CHD2-218ENST00000629346 DOCK1Q14185 1865 aa14.96□□□□□ -0.01
CHD2-218ENST00000629346 PRDM5Q9NQX1 630 aaPredicted RBP14.96□□□□□ -0.01
CHD2-218ENST00000629346 MORF4L1Q9UBU8 362 aa14.96□□□□□ -0.01
CHD2-218ENST00000629346 ATP11BQ9Y2G3 1177 aa14.96□□□□□ -0.01
CHD2-218ENST00000629346 RTP1P59025 263 aa14.95□□□□□ -0.02
CHD2-218ENST00000629346 SMAD3P84022 425 aaKnown RBP14.95□□□□□ -0.02
CHD2-218ENST00000629346 PDE3AQ14432 1141 aa14.95□□□□□ -0.02
CHD2-218ENST00000629346 PUM3Q15397 648 aaKnown RBP14.95□□□□□ -0.02
CHD2-218ENST00000629346 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
CHD2-218ENST00000629346 TRMT44Q8IYL2 757 aaKnown RBP14.95□□□□□ -0.02
CHD2-218ENST00000629346 ZNF280CQ8ND82 737 aa14.95□□□□□ -0.02
CHD2-218ENST00000629346 SOCS4Q8WXH5 440 aa14.95□□□□□ -0.02
CHD2-218ENST00000629346 IDI2Q9BXS1 227 aa14.95□□□□□ -0.02
CHD2-218ENST00000629346 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
CHD2-218ENST00000629346 NBPF7P0C2Y1 421 aaPredicted RBP14.94□□□□□ -0.02
CHD2-218ENST00000629346 FGFR2P21802 821 aa14.94□□□□□ -0.02
CHD2-218ENST00000629346 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
CHD2-218ENST00000629346 MAP3K12Q12852 859 aa14.94□□□□□ -0.02
CHD2-218ENST00000629346 GPRC5AQ8NFJ5 357 aa14.94□□□□□ -0.02
CHD2-218ENST00000629346 PPM1EQ8WY54 764 aa14.94□□□□□ -0.02
CHD2-218ENST00000629346 BADQ92934 168 aa14.94□□□□□ -0.02
CHD2-218ENST00000629346 P2RX7Q99572 595 aaKnown RBP14.94□□□□□ -0.02
CHD2-218ENST00000629346 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHD2-218ENST00000629346 TXNRD2Q9NNW7 524 aa14.94□□□□□ -0.02
CHD2-218ENST00000629346 DDX4Q9NQI0 724 aaKnown RBP14.94□□□□□ -0.02
CHD2-218ENST00000629346 VAMP4O75379 141 aa14.93□□□□□ -0.02
CHD2-218ENST00000629346 SLC5A1P13866 664 aa14.93□□□□□ -0.02
CHD2-218ENST00000629346 CNGA1P29973 690 aa14.93□□□□□ -0.02
CHD2-218ENST00000629346 GRIN2CQ14957 1233 aa14.93□□□□□ -0.02
CHD2-218ENST00000629346 SRCIN1Q9C0H9 1055 aa14.93□□□□□ -0.02
CHD2-218ENST00000629346 ALDH1L1O75891 902 aa14.92□□□□□ -0.02
CHD2-218ENST00000629346 RGS2P41220 211 aa14.92□□□□□ -0.02
CHD2-218ENST00000629346 USP6NLQ92738 828 aa14.92□□□□□ -0.02
CHD2-218ENST00000629346 PORCNQ9H237 461 aa14.92□□□□□ -0.02
CHD2-218ENST00000629346 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
CHD2-218ENST00000629346 MAST2Q6P0Q8 1798 aa14.92□□□□□ -0.02
CHD2-218ENST00000629346 KIF16BQ96L93 1317 aa14.92□□□□□ -0.02
CHD2-218ENST00000629346 MAPK4P31152 587 aa14.91□□□□□ -0.02
CHD2-218ENST00000629346 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
CHD2-218ENST00000629346 Q3C1V9 767 aa14.91□□□□□ -0.02
CHD2-218ENST00000629346 GPR142Q7Z601 462 aa14.91□□□□□ -0.02
CHD2-218ENST00000629346 WWC1Q8IX03 1113 aa14.91□□□□□ -0.02
CHD2-218ENST00000629346 LPIN2Q92539 896 aa14.91□□□□□ -0.02
CHD2-218ENST00000629346 PAGR1Q9BTK6 254 aa14.91□□□□□ -0.02
CHD2-218ENST00000629346 NDUFB9Q9Y6M9 179 aa14.91□□□□□ -0.02
CHD2-218ENST00000629346 LOC285556D6RIA3 1793 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 MYH13Q9UKX3 1938 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 LTBP2Q14767 1821 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 USP17L5A8MUK1 530 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 HERVK_113P62684 666 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 MORN1Q5T089 497 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 GJC2Q5T442 439 aaPredicted RBP14.9□□□□□ -0.02
CHD2-218ENST00000629346 PLEKHH3Q7Z736 793 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 ANKRD44Q8N8A2 993 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 ADAMTS19Q8TE59 1207 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 APBA2Q99767 749 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 OSBPL5Q9H0X9 879 aaPredicted RBP14.9□□□□□ -0.02
CHD2-218ENST00000629346 RBPJLQ9UBG7 517 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 DDX20Q9UHI6 824 aaKnown RBP14.9□□□□□ -0.02
CHD2-218ENST00000629346 FANCIQ9NVI1 1328 aa14.9□□□□□ -0.02
CHD2-218ENST00000629346 RFX7Q2KHR2 1363 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
CHD2-218ENST00000629346 DNM1LO00429 736 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 TBC1D12O60347 775 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
CHD2-218ENST00000629346 BTDP43251 543 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
CHD2-218ENST00000629346 MTMR2Q13614 643 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 RRP1BQ14684 758 aaKnown RBP14.89□□□□□ -0.03
CHD2-218ENST00000629346 RABL6Q3YEC7 729 aaPredicted RBP14.89□□□□□ -0.03
CHD2-218ENST00000629346 SH3D19Q5HYK7 790 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 MFSD14CQ5VZR4 134 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 SLC39A5Q6ZMH5 540 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 LPAR1Q92633 364 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
CHD2-218ENST00000629346 GNL3LQ9NVN8 582 aaKnown RBP14.89□□□□□ -0.03
CHD2-218ENST00000629346 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 FLRT1Q9NZU1 646 aa14.89□□□□□ -0.03
CHD2-218ENST00000629346 CAP2P40123 477 aa14.88□□□□□ -0.03
CHD2-218ENST00000629346 ERVK-9P63128 1117 aa14.88□□□□□ -0.03
CHD2-218ENST00000629346 ERVK-24P63145 666 aa14.88□□□□□ -0.03
CHD2-218ENST00000629346 TRIM60Q495X7 471 aa14.88□□□□□ -0.03
CHD2-218ENST00000629346 DZIP1Q86YF9 867 aaKnown RBP14.88□□□□□ -0.03
CHD2-218ENST00000629346 EDC3Q96F86 508 aaKnown RBP14.88□□□□□ -0.03
CHD2-218ENST00000629346 ASB2Q96Q27 587 aa14.88□□□□□ -0.03
CHD2-218ENST00000629346 UHRF1Q96T88 793 aaPredicted RBP14.88□□□□□ -0.03
CHD2-218ENST00000629346 TBC1D2Q9BYX2 928 aa14.88□□□□□ -0.03
CHD2-218ENST00000629346 AS3MTQ9HBK9 375 aa14.88□□□□□ -0.03
CHD2-218ENST00000629346 GAKO14976 1311 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms