RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 KRT32Q14532 448 aa13.71□□□□□ -0.21
PTPN7-219ENST00000629151 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
PTPN7-219ENST00000629151 NBPF12Q5TAG4 269 aaPredicted RBP13.71□□□□□ -0.21
PTPN7-219ENST00000629151 ARMC9Q7Z3E5 817 aa13.71□□□□□ -0.21
PTPN7-219ENST00000629151 C2orf69Q8N8R5 385 aa13.71□□□□□ -0.21
PTPN7-219ENST00000629151 CCDC17Q96LX7 622 aa13.71□□□□□ -0.21
PTPN7-219ENST00000629151 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTPN7-219ENST00000629151 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.21
PTPN7-219ENST00000629151 FGRP09769 529 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 IREB2P48200 963 aaKnown RBP13.7□□□□□ -0.22
PTPN7-219ENST00000629151 TRDNQ13061 729 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 MAP3K11Q16584 847 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 MKNK2Q9HBH9 465 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 ROBO3Q96MS0 1386 aa13.7□□□□□ -0.22
PTPN7-219ENST00000629151 HSPA4P34932 840 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 TATDN1Q6P1N9 297 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 MFSD6Q6ZSS7 791 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-219ENST00000629151 IL27Q8NEV9 243 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 STAG1Q8WVM7 1258 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 KRT23Q9C075 422 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 ZNF112Q9UJU3 913 aa13.69□□□□□ -0.22
PTPN7-219ENST00000629151 ADAMTSL1Q8N6G6 1762 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 PASKQ96RG2 1323 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 ORC4O43929 436 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 CTNND1O60716 968 aaKnown RBP13.68□□□□□ -0.22
PTPN7-219ENST00000629151 CELF2O95319 508 aaKnown RBP13.68□□□□□ -0.22
PTPN7-219ENST00000629151 CDK8P49336 464 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 ANAPC15P60006 121 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 PRAMEF18Q5VWM3 479 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 MIGA2Q7L4E1 593 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 KCNB2Q92953 911 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 KLRG1Q96E93 195 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 BACH2Q9BYV9 841 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 GBA2Q9HCG7 927 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-219ENST00000629151 CABP5Q9NP86 173 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 MYH7P12883 1935 aa13.68□□□□□ -0.22
PTPN7-219ENST00000629151 TRAF5O00463 557 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 SLC27A2O14975 620 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 USP2O75604 605 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-219ENST00000629151 CYP21A2P08686 494 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
PTPN7-219ENST00000629151 CYP2D6P10635 497 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 PSMA5P28066 241 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-219ENST00000629151 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-219ENST00000629151 CCDC178Q5BJE1 867 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 ANKRD13AQ8IZ07 590 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 ESR2Q92731 530 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 TBC1D2Q9BYX2 928 aa13.67□□□□□ -0.22
PTPN7-219ENST00000629151 SCAF8Q9UPN6 1271 aaKnown RBP13.67□□□□□ -0.22
PTPN7-219ENST00000629151 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
PTPN7-219ENST00000629151 CYP2D7A0A087X1C5 515 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 PHF20L1A8MW92 1017 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 ASNSP08243 561 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 CAP2P40123 477 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 HAND2P61296 217 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 LDLRAD1Q5T700 205 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
PTPN7-219ENST00000629151 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 ZNF408Q9H9D4 720 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
PTPN7-219ENST00000629151 CSADQ9Y600 493 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 AK9Q5TCS8 1911 aa13.66□□□□□ -0.22
PTPN7-219ENST00000629151 UTRNP46939 3433 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 TMEM88BA6NKF7 163 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 SHMT1P34896 483 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 CTDSPL2Q05D32 466 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 NOL9Q5SY16 702 aaKnown RBP13.65□□□□□ -0.22
PTPN7-219ENST00000629151 CST9Q5W186 159 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 TMEM179Q6ZVK1 233 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTPN7-219ENST00000629151 DYNLL2Q96FJ2 89 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 HHIPL1Q96JK4 782 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 MTA3Q9BTC8 594 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 PICK1Q9NRD5 415 aa13.65□□□□□ -0.22
PTPN7-219ENST00000629151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTPN7-219ENST00000629151 E7EWF7 191 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 SLC4A8Q2Y0W8 1093 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 IQCA1Q86XH1 822 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 SCYL3Q8IZE3 742 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 NEDD1Q8NHV4 660 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 KANSL2Q9H9L4 492 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 ECM29Q5VYK3 1845 aa13.64□□□□□ -0.23
PTPN7-219ENST00000629151 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms