RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 ZFYVE28Q9HCC9 887 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 ADGRA2Q96PE1 1338 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
CHD2-217ENST00000629136 CYP7A1P22680 504 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 SP3Q02447 781 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 RRP1BQ14684 758 aaKnown RBP13.13□□□□□ -0.31
CHD2-217ENST00000629136 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 CCDC84Q86UT8 332 aaPredicted RBP13.13□□□□□ -0.31
CHD2-217ENST00000629136 MIGA1Q8NAN2 632 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 AFG3L2Q9Y4W6 797 aa13.13□□□□□ -0.31
CHD2-217ENST00000629136 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
CHD2-217ENST00000629136 TLR2O60603 784 aa13.12□□□□□ -0.31
CHD2-217ENST00000629136 RGS19P49795 217 aa13.12□□□□□ -0.31
CHD2-217ENST00000629136 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
CHD2-217ENST00000629136 MAP3K12Q12852 859 aa13.12□□□□□ -0.31
CHD2-217ENST00000629136 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
CHD2-217ENST00000629136 EDC3Q96F86 508 aaKnown RBP13.12□□□□□ -0.31
CHD2-217ENST00000629136 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
CHD2-217ENST00000629136 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
CHD2-217ENST00000629136 HERC5Q9UII4 1024 aaKnown RBP13.12□□□□□ -0.31
CHD2-217ENST00000629136 TRIM17Q9Y577 477 aa13.12□□□□□ -0.31
CHD2-217ENST00000629136 ZHX2Q9Y6X8 837 aa13.12□□□□□ -0.31
CHD2-217ENST00000629136 PDHXO00330 501 aa13.11□□□□□ -0.31
CHD2-217ENST00000629136 CXCL11O14625 94 aa13.11□□□□□ -0.31
CHD2-217ENST00000629136 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
CHD2-217ENST00000629136 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
CHD2-217ENST00000629136 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
CHD2-217ENST00000629136 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
CHD2-217ENST00000629136 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
CHD2-217ENST00000629136 RIOK1Q9BRS2 568 aaKnown RBP13.11□□□□□ -0.31
CHD2-217ENST00000629136 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
CHD2-217ENST00000629136 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
CHD2-217ENST00000629136 PALD1Q9ULE6 856 aa13.11□□□□□ -0.31
CHD2-217ENST00000629136 GOLIM4O00461 696 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
CHD2-217ENST00000629136 PDE6AP16499 860 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 ATP5JP18859 108 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 CAP2P40123 477 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 SOX10P56693 466 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 C17orf99Q6UX52 265 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
CHD2-217ENST00000629136 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
CHD2-217ENST00000629136 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 TRIM75PA6NK02 468 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
CHD2-217ENST00000629136 SHROOM1Q2M3G4 852 aaPredicted RBP13.09□□□□□ -0.31
CHD2-217ENST00000629136 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 ARHGAP39Q9C0H5 1083 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 DCTPP1Q9H773 170 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 PAG1Q9NWQ8 432 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 SAP30BPQ9UHR5 308 aaKnown RBP13.09□□□□□ -0.31
CHD2-217ENST00000629136 PTPN22Q9Y2R2 807 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 ZNF532Q9HCE3 1301 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 PARP14Q460N5 1801 aa13.09□□□□□ -0.31
CHD2-217ENST00000629136 CYP2C8P10632 490 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 CTGFP29279 349 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 JAG1P78504 1218 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 SLC9C2Q5TAH2 1124 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.32
CHD2-217ENST00000629136 PARK7Q99497 189 aaKnown RBP13.08□□□□□ -0.32
CHD2-217ENST00000629136 HAUS7Q99871 368 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
CHD2-217ENST00000629136 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
CHD2-217ENST00000629136 DOCK3Q8IZD9 2030 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 MAGEB6P1A0A0J9YX57 407 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 GDF11O95390 407 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 CHGBP05060 677 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 USP5P45974 858 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 CRACR2BQ8N4Y2 399 aaPredicted RBP13.07□□□□□ -0.32
CHD2-217ENST00000629136 SLC45A1Q9Y2W3 748 aa13.07□□□□□ -0.32
CHD2-217ENST00000629136 USP17L5A8MUK1 530 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 BCRP11274 1271 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 ADD2P35612 726 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 MLLT1Q03111 559 aaPredicted RBP13.06□□□□□ -0.32
CHD2-217ENST00000629136 SPP2Q13103 211 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 FOXP4Q8IVH2 680 aaPredicted RBP13.06□□□□□ -0.32
CHD2-217ENST00000629136 PROCA1Q8NCQ7 364 aaPredicted RBP13.06□□□□□ -0.32
CHD2-217ENST00000629136 ZNF280CQ8ND82 737 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 CRBNQ96SW2 442 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 TBC1D2Q9BYX2 928 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 EHD4Q9H223 541 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 AGTPBP1Q9UPW5 1226 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 PTCH2Q9Y6C5 1203 aa13.06□□□□□ -0.32
CHD2-217ENST00000629136 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 ASNSP08243 561 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 PLCD1P51178 756 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 HMGCS2P54868 508 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms