RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 FPGT-TNNI3KV9GXZ4 949 aa19.44■□□□□ 0.7
PNKP-222ENST00000629088 UBXN2AP68543 259 aa19.43■□□□□ 0.7
PNKP-222ENST00000629088 GADL1Q6ZQY3 521 aa19.43■□□□□ 0.7
PNKP-222ENST00000629088 TBC1D9Q6ZT07 1266 aa19.43■□□□□ 0.7
PNKP-222ENST00000629088 TBC1D2Q9BYX2 928 aa19.43■□□□□ 0.7
PNKP-222ENST00000629088 OSBPL5Q9H0X9 879 aaPredicted RBP19.43■□□□□ 0.7
PNKP-222ENST00000629088 LRP2BPQ9P2M1 347 aa19.43■□□□□ 0.7
PNKP-222ENST00000629088 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
PNKP-222ENST00000629088 PLCG2P16885 1265 aa19.42■□□□□ 0.7
PNKP-222ENST00000629088 OS9Q13438 667 aaPredicted RBP19.42■□□□□ 0.7
PNKP-222ENST00000629088 TTC39AQ5SRH9 613 aa19.42■□□□□ 0.7
PNKP-222ENST00000629088 SLAIN1Q8ND83 568 aa19.42■□□□□ 0.7
PNKP-222ENST00000629088 NOL10Q9BSC4 688 aaKnown RBP19.42■□□□□ 0.7
PNKP-222ENST00000629088 UNC93B1Q9H1C4 597 aa19.42■□□□□ 0.7
PNKP-222ENST00000629088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.7
PNKP-222ENST00000629088 RBM27Q9P2N5 1060 aaKnown RBP19.42■□□□□ 0.7
PNKP-222ENST00000629088 MAST2Q6P0Q8 1798 aa19.42■□□□□ 0.7
PNKP-222ENST00000629088 ZBTB7BO15156 539 aaPredicted RBP19.41■□□□□ 0.7
PNKP-222ENST00000629088 SURF6O75683 361 aaKnown RBP19.41■□□□□ 0.7
PNKP-222ENST00000629088 BAG3O95817 575 aa19.41■□□□□ 0.7
PNKP-222ENST00000629088 U2AF1L4Q8WU68 220 aaKnown RBP19.41■□□□□ 0.7
PNKP-222ENST00000629088 HERC5Q9UII4 1024 aaKnown RBP19.41■□□□□ 0.7
PNKP-222ENST00000629088 PTPRFP10586 1907 aa19.41■□□□□ 0.7
PNKP-222ENST00000629088 PHIPQ8WWQ0 1821 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 ADCY3O60266 1144 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 FLT3LGP49771 235 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 PPP4CP60510 307 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 ITPRIPQ8IWB1 547 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 TEX11Q8IYF3 940 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 DBNDD2Q9BQY9 259 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 HTATIP2Q9BUP3 242 aa19.4■□□□□ 0.7
PNKP-222ENST00000629088 DHX36Q9H2U1 1008 aaKnown RBP19.4■□□□□ 0.7
PNKP-222ENST00000629088 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.4■□□□□ 0.7
PNKP-222ENST00000629088 ELNP15502 786 aa19.39■□□□□ 0.69
PNKP-222ENST00000629088 NAA16Q6N069 864 aaPredicted RBP19.39■□□□□ 0.69
PNKP-222ENST00000629088 CCDC84Q86UT8 332 aaPredicted RBP19.39■□□□□ 0.69
PNKP-222ENST00000629088 MIER1Q8N108 512 aa19.39■□□□□ 0.69
PNKP-222ENST00000629088 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
PNKP-222ENST00000629088 AGTPBP1Q9UPW5 1226 aa19.39■□□□□ 0.69
PNKP-222ENST00000629088 ZBED9Q6R2W3 1325 aa19.39■□□□□ 0.69
PNKP-222ENST00000629088 TRIM75PA6NK02 468 aa19.38■□□□□ 0.69
PNKP-222ENST00000629088 FARP2O94887 1054 aaPredicted RBP19.38■□□□□ 0.69
PNKP-222ENST00000629088 SGPL1O95470 568 aa19.38■□□□□ 0.69
PNKP-222ENST00000629088 CAP2P40123 477 aa19.38■□□□□ 0.69
PNKP-222ENST00000629088 PI4KBQ9UBF8 816 aa19.38■□□□□ 0.69
PNKP-222ENST00000629088 PNMA3Q9UL41 463 aa19.38■□□□□ 0.69
PNKP-222ENST00000629088 INHAP05111 366 aa19.37■□□□□ 0.69
PNKP-222ENST00000629088 CYP2E1P05181 493 aaPredicted RBP19.37■□□□□ 0.69
PNKP-222ENST00000629088 RLBP1P12271 317 aa19.37■□□□□ 0.69
PNKP-222ENST00000629088 DIEXFQ68CQ4 756 aaKnown RBP19.37■□□□□ 0.69
PNKP-222ENST00000629088 TMED8Q6PL24 325 aaPredicted RBP19.37■□□□□ 0.69
PNKP-222ENST00000629088 CERS3Q8IU89 383 aa19.37■□□□□ 0.69
PNKP-222ENST00000629088 ZNF280CQ8ND82 737 aa19.37■□□□□ 0.69
PNKP-222ENST00000629088 SH3RF3Q8TEJ3 882 aaPredicted RBP19.37■□□□□ 0.69
PNKP-222ENST00000629088 SMCR8Q8TEV9 937 aaPredicted RBP19.37■□□□□ 0.69
PNKP-222ENST00000629088 PRO3102Q9H379 93 aa19.37■□□□□ 0.69
PNKP-222ENST00000629088 C1orf115Q9H7X2 142 aa19.37■□□□□ 0.69
PNKP-222ENST00000629088 TNPO2O14787 897 aaKnown RBP19.36■□□□□ 0.69
PNKP-222ENST00000629088 TREML2Q5T2D2 321 aa19.36■□□□□ 0.69
PNKP-222ENST00000629088 METTL16Q86W50 562 aaKnown RBP19.36■□□□□ 0.69
PNKP-222ENST00000629088 ERC1Q8IUD2 1116 aa19.36■□□□□ 0.69
PNKP-222ENST00000629088 PXYLP1Q8TE99 480 aa19.36■□□□□ 0.69
PNKP-222ENST00000629088 SNRKQ9NRH2 765 aa19.36■□□□□ 0.69
PNKP-222ENST00000629088 AATFQ9NY61 560 aaKnown RBP eCLIP19.36■□□□□ 0.69
PNKP-222ENST00000629088 DBNLQ9UJU6 430 aaKnown RBP19.36■□□□□ 0.69
PNKP-222ENST00000629088 NR2E3Q9Y5X4 410 aa19.36■□□□□ 0.69
PNKP-222ENST00000629088 LOC285556D6RIA3 1793 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 FAM196BA6NMK8 535 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 TFRCP02786 760 aaKnown RBP19.35■□□□□ 0.69
PNKP-222ENST00000629088 PABPC4Q13310 644 aaKnown RBP eCLIP19.35■□□□□ 0.69
PNKP-222ENST00000629088 IRF5Q13568 498 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 SH3D19Q5HYK7 790 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 CEP85Q6P2H3 762 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 ANKRD13CQ8N6S4 541 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 AS3MTQ9HBK9 375 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 GINM1Q9NU53 330 aa19.35■□□□□ 0.69
PNKP-222ENST00000629088 USP17L5A8MUK1 530 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 MS4A1P11836 297 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 ZAP70P43403 619 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 SPP2Q13103 211 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 FAM110CQ1W6H9 321 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 FOXP4Q8IVH2 680 aaPredicted RBP19.34■□□□□ 0.69
PNKP-222ENST00000629088 DEFB118Q96PH6 123 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 TAOK2Q9UL54 1235 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 MGAMO43451 1857 aa19.34■□□□□ 0.69
PNKP-222ENST00000629088 FLT1P17948 1338 aa19.33■□□□□ 0.69
PNKP-222ENST00000629088 FOCADQ5VW36 1801 aa19.33■□□□□ 0.69
PNKP-222ENST00000629088 ATAD5Q96QE3 1844 aa19.33■□□□□ 0.69
PNKP-222ENST00000629088 ASNSP08243 561 aa19.33■□□□□ 0.68
PNKP-222ENST00000629088 CAPN2P17655 700 aa19.33■□□□□ 0.68
PNKP-222ENST00000629088 GCLCP48506 637 aaPredicted RBP19.33■□□□□ 0.68
PNKP-222ENST00000629088 ADGRA1Q86SQ6 560 aa19.33■□□□□ 0.68
PNKP-222ENST00000629088 EAF2Q96CJ1 260 aaPredicted RBP19.33■□□□□ 0.68
PNKP-222ENST00000629088 WDR18Q9BV38 432 aa19.33■□□□□ 0.68
PNKP-222ENST00000629088 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
PNKP-222ENST00000629088 TGFBRAP1Q8WUH2 860 aa19.32■□□□□ 0.68
PNKP-222ENST00000629088 COA7Q96BR5 231 aa19.32■□□□□ 0.68
PNKP-222ENST00000629088 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
PNKP-222ENST00000629088 PAK6Q9NQU5 681 aaPredicted RBP19.32■□□□□ 0.68
PNKP-222ENST00000629088 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms