RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 TTC6Q86TZ1 520 aa20.21■□□□□ 0.83
UBE3D-208ENST00000626828 METTL16Q86W50 562 aaKnown RBP20.21■□□□□ 0.83
UBE3D-208ENST00000626828 SCYL3Q8IZE3 742 aa20.21■□□□□ 0.83
UBE3D-208ENST00000626828 PI4K2BQ8TCG2 481 aa20.21■□□□□ 0.83
UBE3D-208ENST00000626828 STAP2Q9UGK3 403 aa20.21■□□□□ 0.83
UBE3D-208ENST00000626828 CASP8AP2Q9UKL3 1982 aa20.21■□□□□ 0.83
UBE3D-208ENST00000626828 TBC1D8O95759 1140 aa20.2■□□□□ 0.82
UBE3D-208ENST00000626828 ZFYP08048 801 aaPredicted RBP20.2■□□□□ 0.82
UBE3D-208ENST00000626828 SLURP2P0DP57 97 aa20.2■□□□□ 0.82
UBE3D-208ENST00000626828 CETPP11597 493 aa20.2■□□□□ 0.82
UBE3D-208ENST00000626828 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
UBE3D-208ENST00000626828 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
UBE3D-208ENST00000626828 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
UBE3D-208ENST00000626828 SAP30BPQ9UHR5 308 aaKnown RBP20.2■□□□□ 0.82
UBE3D-208ENST00000626828 CDK5RAP2Q96SN8 1893 aa20.2■□□□□ 0.82
UBE3D-208ENST00000626828 CCL15-CCL14A0A0B4J2E2 113 aa20.19■□□□□ 0.82
UBE3D-208ENST00000626828 CXCL11O14625 94 aa20.19■□□□□ 0.82
UBE3D-208ENST00000626828 PTPRAP18433 802 aa20.19■□□□□ 0.82
UBE3D-208ENST00000626828 CCL15Q16663 113 aa20.19■□□□□ 0.82
UBE3D-208ENST00000626828 CRACR2BQ8N4Y2 399 aaPredicted RBP20.19■□□□□ 0.82
UBE3D-208ENST00000626828 PTPN18Q99952 460 aa20.19■□□□□ 0.82
UBE3D-208ENST00000626828 LNPKQ9C0E8 428 aa20.19■□□□□ 0.82
UBE3D-208ENST00000626828 SALL3Q9BXA9 1300 aa20.19■□□□□ 0.82
UBE3D-208ENST00000626828 MYH1P12882 1939 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 FAM196BA6NMK8 535 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 IGF2BP3O00425 579 aaKnown RBP eCLIP20.18■□□□□ 0.82
UBE3D-208ENST00000626828 RNF113AO15541 343 aaKnown RBP20.18■□□□□ 0.82
UBE3D-208ENST00000626828 CAP2P40123 477 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 PDE1AP54750 535 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 NUCB1Q02818 461 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 SLFNL1Q499Z3 407 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 CHD1LQ86WJ1 897 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 LCORLQ8N3X6 602 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 BRI3BPQ8WY22 251 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 KCNH4Q9UQ05 1017 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 ZHX2Q9Y6X8 837 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 FOCADQ5VW36 1801 aa20.18■□□□□ 0.82
UBE3D-208ENST00000626828 MBD4O95243 580 aa20.17■□□□□ 0.82
UBE3D-208ENST00000626828 POLR3DP05423 398 aaPredicted RBP20.17■□□□□ 0.82
UBE3D-208ENST00000626828 NOM1Q5C9Z4 860 aaKnown RBP20.17■□□□□ 0.82
UBE3D-208ENST00000626828 ATP8A2Q9NTI2 1148 aa20.17■□□□□ 0.82
UBE3D-208ENST00000626828 MYH7P12883 1935 aa20.17■□□□□ 0.82
UBE3D-208ENST00000626828 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
UBE3D-208ENST00000626828 PUS7LQ9H0K6 701 aaKnown RBP20.16■□□□□ 0.82
UBE3D-208ENST00000626828 EHD4Q9H223 541 aa20.16■□□□□ 0.82
UBE3D-208ENST00000626828 DCP1AQ9NPI6 582 aaPredicted RBP20.16■□□□□ 0.82
UBE3D-208ENST00000626828 GINM1Q9NU53 330 aa20.16■□□□□ 0.82
UBE3D-208ENST00000626828 MCM9Q9NXL9 1143 aa20.16■□□□□ 0.82
UBE3D-208ENST00000626828 SERPINB13Q9UIV8 391 aa20.16■□□□□ 0.82
UBE3D-208ENST00000626828 AFG3L2Q9Y4W6 797 aa20.16■□□□□ 0.82
UBE3D-208ENST00000626828 CHGBP05060 677 aa20.15■□□□□ 0.82
UBE3D-208ENST00000626828 SDR42E1Q8WUS8 393 aa20.15■□□□□ 0.82
UBE3D-208ENST00000626828 APPBP2Q92624 585 aa20.15■□□□□ 0.82
UBE3D-208ENST00000626828 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
UBE3D-208ENST00000626828 TBC1D2Q9BYX2 928 aa20.15■□□□□ 0.82
UBE3D-208ENST00000626828 ZCCHC17Q9NP64 241 aaKnown RBP20.15■□□□□ 0.82
UBE3D-208ENST00000626828 GPR25O00155 361 aa20.14■□□□□ 0.81
UBE3D-208ENST00000626828 PRKAB2O43741 272 aa20.14■□□□□ 0.81
UBE3D-208ENST00000626828 EVI5LQ96CN4 794 aa20.14■□□□□ 0.81
UBE3D-208ENST00000626828 STRBPQ96SI9 672 aaKnown RBP20.14■□□□□ 0.81
UBE3D-208ENST00000626828 FSD1Q9BTV5 496 aa20.14■□□□□ 0.81
UBE3D-208ENST00000626828 SLC4A4Q9Y6R1 1079 aa20.14■□□□□ 0.81
UBE3D-208ENST00000626828 LAMB1P07942 1786 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 USP17L5A8MUK1 530 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 BTBD19C9JJ37 291 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 ASNSP08243 561 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 PLCD1P51178 756 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 RRP1BQ14684 758 aaKnown RBP20.13■□□□□ 0.81
UBE3D-208ENST00000626828 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 TATDN1Q6P1N9 297 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 FASTKD5Q7L8L6 764 aaKnown RBP20.13■□□□□ 0.81
UBE3D-208ENST00000626828 TICAM2Q86XR7 235 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 OSBP2Q969R2 916 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 R3HDMLQ9H3Y0 253 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 DNAJC18Q9H819 358 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 ZFYVE28Q9HCC9 887 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 TAOK2Q9UL54 1235 aa20.13■□□□□ 0.81
UBE3D-208ENST00000626828 TAF1CQ15572 869 aaPredicted RBP20.12■□□□□ 0.81
UBE3D-208ENST00000626828 ANKRD23Q86SG2 305 aa20.12■□□□□ 0.81
UBE3D-208ENST00000626828 PLEKHM2Q8IWE5 1019 aa20.12■□□□□ 0.81
UBE3D-208ENST00000626828 AMOTL1Q8IY63 956 aa20.12■□□□□ 0.81
UBE3D-208ENST00000626828 FAM43AQ8N2R8 423 aa20.12■□□□□ 0.81
UBE3D-208ENST00000626828 OSBPL3Q9H4L5 887 aa20.12■□□□□ 0.81
UBE3D-208ENST00000626828 FKTNO75072 461 aa20.11■□□□□ 0.81
UBE3D-208ENST00000626828 GNAT2P19087 354 aa20.11■□□□□ 0.81
UBE3D-208ENST00000626828 CRHR2Q13324 411 aa20.11■□□□□ 0.81
UBE3D-208ENST00000626828 ZNF280CQ8ND82 737 aa20.11■□□□□ 0.81
UBE3D-208ENST00000626828 ZNF296Q8WUU4 475 aaPredicted RBP20.11■□□□□ 0.81
UBE3D-208ENST00000626828 AS3MTQ9HBK9 375 aa20.11■□□□□ 0.81
UBE3D-208ENST00000626828 A0A0G2JLL6 359 aaPredicted RBP20.1■□□□□ 0.81
UBE3D-208ENST00000626828 SPP2Q13103 211 aa20.1■□□□□ 0.81
UBE3D-208ENST00000626828 CERKLQ49MI3 558 aaPredicted RBP20.1■□□□□ 0.81
UBE3D-208ENST00000626828 GIMAP6Q6P9H5 292 aa20.1■□□□□ 0.81
UBE3D-208ENST00000626828 PRRT2Q7Z6L0 340 aaPredicted RBP20.1■□□□□ 0.81
UBE3D-208ENST00000626828 WDR18Q9BV38 432 aa20.1■□□□□ 0.81
UBE3D-208ENST00000626828 DOCK1Q14185 1865 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 SIPA1L1O43166 1804 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 TRIM75PA6NK02 468 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 USP17L12C9JPN9 530 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms