RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 NAV1Q8NEY1 1877 aa27.09■■□□□ 1.93
SF1-220ENST00000626028 PTPRAP18433 802 aa27.09■■□□□ 1.93
SF1-220ENST00000626028 CRHR2Q13324 411 aa27.09■■□□□ 1.93
SF1-220ENST00000626028 BOLA2Q9H3K6 86 aa27.09■■□□□ 1.93
SF1-220ENST00000626028 DDX60LQ5H9U9 1706 aaKnown RBP27.09■■□□□ 1.93
SF1-220ENST00000626028 ZFYVE28Q9HCC9 887 aa27.08■■□□□ 1.93
SF1-220ENST00000626028 MAGEB6P1A0A0J9YX57 407 aa27.07■■□□□ 1.92
SF1-220ENST00000626028 SMARCA5O60264 1052 aaPredicted RBP27.07■■□□□ 1.92
SF1-220ENST00000626028 HLA-DOAP06340 250 aa27.07■■□□□ 1.92
SF1-220ENST00000626028 DYNLL1P63167 89 aaKnown RBP27.07■■□□□ 1.92
SF1-220ENST00000626028 TAF1CQ15572 869 aaPredicted RBP27.07■■□□□ 1.92
SF1-220ENST00000626028 ANKRD23Q86SG2 305 aa27.07■■□□□ 1.92
SF1-220ENST00000626028 MAPKAPK5Q8IW41 473 aa27.07■■□□□ 1.92
SF1-220ENST00000626028 MIGA1Q8NAN2 632 aa27.07■■□□□ 1.92
SF1-220ENST00000626028 RIOK1Q9BRS2 568 aaKnown RBP27.07■■□□□ 1.92
SF1-220ENST00000626028 R3HDMLQ9H3Y0 253 aa27.07■■□□□ 1.92
SF1-220ENST00000626028 GINM1Q9NU53 330 aa27.07■■□□□ 1.92
SF1-220ENST00000626028 TCRBV5S4A2TA0A5A2 114 aa27.06■■□□□ 1.92
SF1-220ENST00000626028 USP5P45974 858 aa27.06■■□□□ 1.92
SF1-220ENST00000626028 HDAC1Q13547 482 aaPredicted RBP27.06■■□□□ 1.92
SF1-220ENST00000626028 ZSCAN25Q6NSZ9 544 aa27.06■■□□□ 1.92
SF1-220ENST00000626028 FAM43AQ8N2R8 423 aa27.06■■□□□ 1.92
SF1-220ENST00000626028 BCL11AQ9H165 835 aa27.06■■□□□ 1.92
SF1-220ENST00000626028 AFG3L2Q9Y4W6 797 aa27.06■■□□□ 1.92
SF1-220ENST00000626028 ZHX2Q9Y6X8 837 aa27.06■■□□□ 1.92
SF1-220ENST00000626028 BTBD19C9JJ37 291 aa27.05■■□□□ 1.92
SF1-220ENST00000626028 CAP2P40123 477 aa27.05■■□□□ 1.92
SF1-220ENST00000626028 FASTKD5Q7L8L6 764 aaKnown RBP27.05■■□□□ 1.92
SF1-220ENST00000626028 ERO1AQ96HE7 468 aa27.05■■□□□ 1.92
SF1-220ENST00000626028 TAOK2Q9UL54 1235 aa27.05■■□□□ 1.92
SF1-220ENST00000626028 ZNF532Q9HCE3 1301 aa27.05■■□□□ 1.92
SF1-220ENST00000626028 ADD2P35612 726 aa27.04■■□□□ 1.92
SF1-220ENST00000626028 GCC1Q96CN9 775 aa27.04■■□□□ 1.92
SF1-220ENST00000626028 TRIM34Q9BYJ4 488 aa27.04■■□□□ 1.92
SF1-220ENST00000626028 CRNKL1Q9BZJ0 848 aaKnown RBP27.04■■□□□ 1.92
SF1-220ENST00000626028 EHD4Q9H223 541 aa27.04■■□□□ 1.92
SF1-220ENST00000626028 PALD1Q9ULE6 856 aa27.04■■□□□ 1.92
SF1-220ENST00000626028 TTC41PQ6P2S7 1318 aa27.04■■□□□ 1.92
SF1-220ENST00000626028 MYH8P13535 1937 aa27.04■■□□□ 1.92
SF1-220ENST00000626028 A0A0G2JLL6 359 aaPredicted RBP27.03■■□□□ 1.92
SF1-220ENST00000626028 LOC285556D6RIA3 1793 aa27.03■■□□□ 1.92
SF1-220ENST00000626028 UBE3CQ15386 1083 aa27.03■■□□□ 1.92
SF1-220ENST00000626028 PRRT2Q7Z6L0 340 aaPredicted RBP27.03■■□□□ 1.92
SF1-220ENST00000626028 TTC6Q86TZ1 520 aa27.03■■□□□ 1.92
SF1-220ENST00000626028 CRACR2BQ8N4Y2 399 aaPredicted RBP27.03■■□□□ 1.92
SF1-220ENST00000626028 TLR2O60603 784 aa27.02■■□□□ 1.92
SF1-220ENST00000626028 SP3Q02447 781 aa27.02■■□□□ 1.92
SF1-220ENST00000626028 EDC3Q96F86 508 aaKnown RBP27.02■■□□□ 1.92
SF1-220ENST00000626028 SLC45A1Q9Y2W3 748 aa27.02■■□□□ 1.92
SF1-220ENST00000626028 BAZ2AQ9UIF9 1905 aaKnown RBP27.01■■□□□ 1.91
SF1-220ENST00000626028 FAM196BA6NMK8 535 aa27.01■■□□□ 1.91
SF1-220ENST00000626028 ASNSP08243 561 aa27.01■■□□□ 1.91
SF1-220ENST00000626028 MOGSQ13724 837 aa27.01■■□□□ 1.91
SF1-220ENST00000626028 ARHGEF6Q15052 776 aa27.01■■□□□ 1.91
SF1-220ENST00000626028 ZBTB47Q9UFB7 747 aaPredicted RBP27.01■■□□□ 1.91
SF1-220ENST00000626028 ERC2O15083 957 aa27■■□□□ 1.91
SF1-220ENST00000626028 SERPINB13Q9UIV8 391 aa27■■□□□ 1.91
SF1-220ENST00000626028 PDHXO00330 501 aa26.99■■□□□ 1.91
SF1-220ENST00000626028 SLURP2P0DP57 97 aa26.99■■□□□ 1.91
SF1-220ENST00000626028 AS3MTQ9HBK9 375 aa26.99■■□□□ 1.91
SF1-220ENST00000626028 SAP30BPQ9UHR5 308 aaKnown RBP26.99■■□□□ 1.91
SF1-220ENST00000626028 USP17L5A8MUK1 530 aa26.98■■□□□ 1.91
SF1-220ENST00000626028 CAPN15O75808 1086 aa26.98■■□□□ 1.91
SF1-220ENST00000626028 LRRFIP1Q32MZ4 808 aaKnown RBP26.98■■□□□ 1.91
SF1-220ENST00000626028 FBXO46Q6PJ61 603 aaPredicted RBP26.98■■□□□ 1.91
SF1-220ENST00000626028 KBTBD3Q8NAB2 608 aa26.98■■□□□ 1.91
SF1-220ENST00000626028 ZNF280CQ8ND82 737 aa26.98■■□□□ 1.91
SF1-220ENST00000626028 DNAJC18Q9H819 358 aa26.98■■□□□ 1.91
SF1-220ENST00000626028 GLRX3O76003 335 aaKnown RBP26.97■■□□□ 1.91
SF1-220ENST00000626028 TATDN1Q6P1N9 297 aa26.97■■□□□ 1.91
SF1-220ENST00000626028 PROCA1Q8NCQ7 364 aaPredicted RBP26.97■■□□□ 1.91
SF1-220ENST00000626028 WDR18Q9BV38 432 aa26.97■■□□□ 1.91
SF1-220ENST00000626028 ATP8A2Q9NTI2 1148 aa26.97■■□□□ 1.91
SF1-220ENST00000626028 MGAMO43451 1857 aa26.96■■□□□ 1.91
SF1-220ENST00000626028 ZFYP08048 801 aaPredicted RBP26.96■■□□□ 1.91
SF1-220ENST00000626028 GPAT2Q6NUI2 795 aa26.96■■□□□ 1.91
SF1-220ENST00000626028 PARK7Q99497 189 aaKnown RBP26.96■■□□□ 1.91
SF1-220ENST00000626028 RRP1BQ14684 758 aaKnown RBP26.95■■□□□ 1.9
SF1-220ENST00000626028 RWDD1Q9H446 243 aaPredicted RBP26.95■■□□□ 1.9
SF1-220ENST00000626028 TRIM75PA6NK02 468 aa26.94■■□□□ 1.9
SF1-220ENST00000626028 GNRH1P01148 92 aa26.94■■□□□ 1.9
SF1-220ENST00000626028 C17orf99Q6UX52 265 aa26.94■■□□□ 1.9
SF1-220ENST00000626028 OTOP1Q7RTM1 612 aa26.94■■□□□ 1.9
SF1-220ENST00000626028 LCORLQ8N3X6 602 aa26.94■■□□□ 1.9
SF1-220ENST00000626028 DCP1AQ9NPI6 582 aaPredicted RBP26.94■■□□□ 1.9
SF1-220ENST00000626028 AGTPBP1Q9UPW5 1226 aa26.94■■□□□ 1.9
SF1-220ENST00000626028 ADGRA2Q96PE1 1338 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 CCDC85CA6NKD9 419 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 POLR3DP05423 398 aaPredicted RBP26.93■■□□□ 1.9
SF1-220ENST00000626028 MX1P20591 662 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 SPP2Q13103 211 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 SH3D19Q5HYK7 790 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 CD99L2Q8TCZ2 262 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 DDRGK1Q96HY6 314 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 MCM9Q9NXL9 1143 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 TRIM17Q9Y577 477 aa26.93■■□□□ 1.9
SF1-220ENST00000626028 C19orf81C9J6K1 198 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 MBD4O95243 580 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 PABPC4Q13310 644 aaKnown RBP eCLIP26.92■■□□□ 1.9
SF1-220ENST00000626028 KIF22Q14807 665 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms