RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.87□□□□□ -0.19
LINC00963-220ENST00000625171 TACC3Q9Y6A5 838 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 FLT1P17948 1338 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 COL2A1P02458 1487 aaPredicted RBP13.87□□□□□ -0.19
LINC00963-220ENST00000625171 PFKFB2O60825 505 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 ENTPD3O75355 529 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 ZNF280AP59817 542 aaPredicted RBP13.86□□□□□ -0.19
LINC00963-220ENST00000625171 CTDSPL2Q05D32 466 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 ME3Q16798 604 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 CCDC178Q5BJE1 867 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 METTL16Q86W50 562 aaKnown RBP13.86□□□□□ -0.19
LINC00963-220ENST00000625171 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
LINC00963-220ENST00000625171 EHD4Q9H223 541 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 TCP11L1Q9NUJ3 509 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 USP40Q9NVE5 1235 aa13.86□□□□□ -0.19
LINC00963-220ENST00000625171 ANGEL1Q9UNK9 670 aaKnown RBP13.86□□□□□ -0.19
LINC00963-220ENST00000625171 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 POTECB2RU33 542 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 HSP90AA1P07900 732 aaKnown RBP13.85□□□□□ -0.19
LINC00963-220ENST00000625171 USP17L8P0C7I0 530 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 SCNN1DP51172 638 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 GABPAQ06546 454 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 SART3Q15020 963 aaKnown RBP13.85□□□□□ -0.19
LINC00963-220ENST00000625171 PPP2R5BQ15173 497 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 ANKS1AQ92625 1134 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 BRF1Q92994 677 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 NEDD4P46934 1319 aa13.85□□□□□ -0.19
LINC00963-220ENST00000625171 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 B4E1Z4 1266 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 F8W031 263 aaPredicted RBP13.84□□□□□ -0.19
LINC00963-220ENST00000625171 SH2B2O14492 632 aaPredicted RBP13.84□□□□□ -0.19
LINC00963-220ENST00000625171 KDM4AO75164 1064 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 RAD17O75943 681 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
LINC00963-220ENST00000625171 CFAP100Q494V2 611 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 CYB5R4Q7L1T6 521 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
LINC00963-220ENST00000625171 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
LINC00963-220ENST00000625171 NID2Q14112 1375 aa13.83□□□□□ -0.19
LINC00963-220ENST00000625171 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.19
LINC00963-220ENST00000625171 FOCADQ5VW36 1801 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 DHX16O60231 1041 aaKnown RBP13.83□□□□□ -0.2
LINC00963-220ENST00000625171 POLR3DP05423 398 aaPredicted RBP13.83□□□□□ -0.2
LINC00963-220ENST00000625171 NOVP48745 357 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 EIF6P56537 245 aaKnown RBP13.83□□□□□ -0.2
LINC00963-220ENST00000625171 NUCB2P80303 420 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 FGD1P98174 961 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 SEC23AQ15436 765 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.2
LINC00963-220ENST00000625171 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 GTF3C6Q969F1 213 aa13.83□□□□□ -0.2
LINC00963-220ENST00000625171 PRMT6Q96LA8 375 aaPredicted RBP13.83□□□□□ -0.2
LINC00963-220ENST00000625171 DDX60LQ5H9U9 1706 aaKnown RBP13.83□□□□□ -0.2
LINC00963-220ENST00000625171 PLCD1P51178 756 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 DLGAP5Q15398 846 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 FAM83AQ86UY5 434 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 DGKHQ86XP1 1220 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 TCEANC2Q96MN5 208 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
LINC00963-220ENST00000625171 LY9Q9HBG7 655 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 DDX4Q9NQI0 724 aaKnown RBP13.82□□□□□ -0.2
LINC00963-220ENST00000625171 PRDM10Q9NQV6 1147 aa13.82□□□□□ -0.2
LINC00963-220ENST00000625171 CYP2D7A0A087X1C5 515 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 ERICH2A1L162 156 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
LINC00963-220ENST00000625171 LARGE1O95461 756 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 CDK8P49336 464 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 ST3GAL1Q11201 340 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 GPC2Q8N158 579 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 SMARCC2Q8TAQ2 1214 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 ZSCAN10Q96SZ4 725 aaPredicted RBP13.81□□□□□ -0.2
LINC00963-220ENST00000625171 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 INCENPQ9NQS7 918 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 PI4KBQ9UBF8 816 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 FAM198AQ9UFP1 575 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 CNTNAP1P78357 1384 aa13.81□□□□□ -0.2
LINC00963-220ENST00000625171 CDK5RAP2Q96SN8 1893 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 BAZ2AQ9UIF9 1905 aaKnown RBP13.8□□□□□ -0.2
LINC00963-220ENST00000625171 CYP2D6P10635 497 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 RASA1P20936 1047 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00963-220ENST00000625171 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 APOBRQ0VD83 1088 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 TMEM67Q5HYA8 995 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
LINC00963-220ENST00000625171 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 FAM151AQ8WW52 585 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
LINC00963-220ENST00000625171 UBAC1Q9BSL1 405 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms