RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 RBM6P78332 1123 aaKnown RBP13.82□□□□□ -0.2
TP53-227ENST00000622645 SPECC1Q5M775 1068 aa13.82□□□□□ -0.2
TP53-227ENST00000622645 CRACR2BQ8N4Y2 399 aaPredicted RBP13.82□□□□□ -0.2
TP53-227ENST00000622645 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
TP53-227ENST00000622645 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
TP53-227ENST00000622645 TNKSO95271 1327 aa13.82□□□□□ -0.2
TP53-227ENST00000622645 PRDM1O75626 825 aa13.82□□□□□ -0.2
TP53-227ENST00000622645 TOB1P50616 345 aaPredicted RBP13.82□□□□□ -0.2
TP53-227ENST00000622645 WASF1Q92558 559 aa13.82□□□□□ -0.2
TP53-227ENST00000622645 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.82□□□□□ -0.2
TP53-227ENST00000622645 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
TP53-227ENST00000622645 NR5A1Q13285 461 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 PNOCQ13519 176 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 TIAM2Q8IVF5 1701 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
TP53-227ENST00000622645 SEC23AQ15436 765 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 LONRF3Q496Y0 759 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 ESR2Q92731 530 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 TIGD1Q96MW7 591 aa13.81□□□□□ -0.2
TP53-227ENST00000622645 DEXIO95424 95 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 EVX2Q03828 476 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 GRIN1Q05586 938 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 NCAPHQ15003 741 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 OXER1Q8TDS5 423 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 BPIFA3Q9BQP9 254 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 NID2Q14112 1375 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 CHD4Q14839 1912 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 RIOK3O14730 519 aaKnown RBP13.8□□□□□ -0.2
TP53-227ENST00000622645 ATP2B1P20020 1258 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 TFCP2L1Q9NZI6 479 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 ANAPC4Q9UJX5 808 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 KCNH3Q9ULD8 1083 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
TP53-227ENST00000622645 hCG_1642624A0A1W2PR95 340 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 CUTAO60888 179 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 SMC2O95347 1197 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 SKILP12757 684 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.22e-8■■■■□ 23.7
TP53-227ENST00000622645 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 ENAHQ8N8S7 591 aaPredicted RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 MTA3Q9BTC8 594 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 XPO4Q9C0E2 1151 aaKnown RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 IFNKQ9P0W0 207 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 ECM29Q5VYK3 1845 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 FAM237AA0A1B0GTK4 181 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 LMOD1P29536 600 aaPredicted RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 SLC10A5Q5PT55 438 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 METTL16Q86W50 562 aaKnown RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
TP53-227ENST00000622645 PCDHB6Q9Y5E3 794 aa13.79□□□□□ -0.2
TP53-227ENST00000622645 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
TP53-227ENST00000622645 USP27XA6NNY8 438 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 FOXN1O15353 648 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 TPD52L1Q16890 204 aaPredicted RBP13.78□□□□□ -0.2
TP53-227ENST00000622645 FBXO33Q7Z6M2 555 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 CNNM3Q8NE01 707 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 ZSCAN10Q96SZ4 725 aaPredicted RBP13.78□□□□□ -0.2
TP53-227ENST00000622645 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
TP53-227ENST00000622645 JAG2Q9Y219 1238 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 LAMB2P55268 1798 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 USP17L12C9JPN9 530 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 USP17L21D6R901 530 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 ATP1A3P13637 1013 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 CTR9Q6PD62 1173 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 KRBA2Q6ZNG9 492 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 NBPF5PQ86XG9 351 aaPredicted RBP13.78□□□□□ -0.2
TP53-227ENST00000622645 NLRP3Q96P20 1036 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 SETDB2Q96T68 719 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 CABP5Q9NP86 173 aa13.78□□□□□ -0.2
TP53-227ENST00000622645 TNNT1P13805 278 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 CCZ1BP86790 482 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 CCZ1P86791 482 aaPredicted RBP13.77□□□□□ -0.2
TP53-227ENST00000622645 MECOMQ03112 1051 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 AMIGO3Q86WK7 504 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 NSUN4Q96CB9 384 aaKnown RBP13.77□□□□□ -0.2
TP53-227ENST00000622645 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.2
TP53-227ENST00000622645 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 CNTNAP4Q9C0A0 1308 aa13.77□□□□□ -0.2
TP53-227ENST00000622645 GNPATO15228 680 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 IFIT1BQ5T764 474 aaKnown RBP13.77□□□□□ -0.21
TP53-227ENST00000622645 NGLY1Q96IV0 654 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 BRIP1Q9BX63 1249 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 NARFQ9UHQ1 456 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
TP53-227ENST00000622645 CACNA1SQ13698 1873 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 COL5A3P25940 1745 aaPredicted RBP13.77□□□□□ -0.21
TP53-227ENST00000622645 FAM205CA6NFA0 338 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 NEMFO60524 1076 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms