RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 RGS19P49795 217 aa21.85■■□□□ 1.09
SCAMP4-213ENST00000621748 RRP1BQ14684 758 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-213ENST00000621748 CCDC84Q86UT8 332 aaPredicted RBP21.85■■□□□ 1.09
SCAMP4-213ENST00000621748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.85■■□□□ 1.09
SCAMP4-213ENST00000621748 DHX36Q9H2U1 1008 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-213ENST00000621748 PI4KBQ9UBF8 816 aa21.85■■□□□ 1.09
SCAMP4-213ENST00000621748 HTTP42858 3142 aa21.85■■□□□ 1.09
SCAMP4-213ENST00000621748 PTPRFP10586 1907 aa21.84■■□□□ 1.09
SCAMP4-213ENST00000621748 PDHXO00330 501 aa21.84■■□□□ 1.09
SCAMP4-213ENST00000621748 GPAT2Q6NUI2 795 aa21.84■■□□□ 1.09
SCAMP4-213ENST00000621748 HERC5Q9UII4 1024 aaKnown RBP21.84■■□□□ 1.09
SCAMP4-213ENST00000621748 PALD1Q9ULE6 856 aa21.84■■□□□ 1.09
SCAMP4-213ENST00000621748 A0A0G2JLL6 359 aaPredicted RBP21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 GOLIM4O00461 696 aa21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 SMARCA5O60264 1052 aaPredicted RBP21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 TTF1Q15361 905 aaPredicted RBP21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 PRRT2Q7Z6L0 340 aaPredicted RBP21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 EDC3Q96F86 508 aaKnown RBP21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 DNAJC2Q99543 621 aaKnown RBP21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 LRRCC1Q9C099 1032 aa21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 EFCC1Q9HA90 598 aa21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 SAP30BPQ9UHR5 308 aaKnown RBP21.83■■□□□ 1.09
SCAMP4-213ENST00000621748 ATAD5Q96QE3 1844 aa21.83■■□□□ 1.08
SCAMP4-213ENST00000621748 CAP2P40123 477 aa21.82■■□□□ 1.08
SCAMP4-213ENST00000621748 BOLA2Q9H3K6 86 aa21.82■■□□□ 1.08
SCAMP4-213ENST00000621748 MYH1P12882 1939 aa21.82■■□□□ 1.08
SCAMP4-213ENST00000621748 CENPFP49454 3210 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 TRIM75PA6NK02 468 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 ATP5JP18859 108 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 RRP1P56182 461 aaKnown RBP21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 SOX10P56693 466 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 SLC9C2Q5TAH2 1124 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 TMED8Q6PL24 325 aaPredicted RBP21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 C17orf99Q6UX52 265 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 METTL16Q86W50 562 aaKnown RBP21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 FOXP4Q8IVH2 680 aaPredicted RBP21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 DCTPP1Q9H773 170 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 DNAJC18Q9H819 358 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 PTPN22Q9Y2R2 807 aa21.81■■□□□ 1.08
SCAMP4-213ENST00000621748 PDE6AP16499 860 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 SLC4A8Q2Y0W8 1093 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 GADL1Q6ZQY3 521 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 FASTKD5Q7L8L6 764 aaKnown RBP21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 CERS3Q8IU89 383 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 RIOK1Q9BRS2 568 aaKnown RBP21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 CPA4Q9UI42 421 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 PCDHB15Q9Y5E8 787 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 ZSWIM8A7E2V4 1837 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 ADGRA2Q96PE1 1338 aa21.8■■□□□ 1.08
SCAMP4-213ENST00000621748 TCRBV5S4A2TA0A5A2 114 aa21.79■■□□□ 1.08
SCAMP4-213ENST00000621748 USP5P45974 858 aa21.79■■□□□ 1.08
SCAMP4-213ENST00000621748 JAG1P78504 1218 aa21.79■■□□□ 1.08
SCAMP4-213ENST00000621748 ARHGAP39Q9C0H5 1083 aa21.79■■□□□ 1.08
SCAMP4-213ENST00000621748 PAG1Q9NWQ8 432 aa21.79■■□□□ 1.08
SCAMP4-213ENST00000621748 ZNF532Q9HCE3 1301 aa21.79■■□□□ 1.08
SCAMP4-213ENST00000621748 CYP2C8P10632 490 aa21.78■■□□□ 1.08
SCAMP4-213ENST00000621748 LACTBP83111 547 aaPredicted RBP21.78■■□□□ 1.08
SCAMP4-213ENST00000621748 SPP2Q13103 211 aa21.78■■□□□ 1.08
SCAMP4-213ENST00000621748 CRACR2BQ8N4Y2 399 aaPredicted RBP21.78■■□□□ 1.08
SCAMP4-213ENST00000621748 HAUS7Q99871 368 aa21.78■■□□□ 1.08
SCAMP4-213ENST00000621748 MAGEB6P1A0A0J9YX57 407 aa21.77■■□□□ 1.08
SCAMP4-213ENST00000621748 HLA-DOAP06340 250 aa21.77■■□□□ 1.08
SCAMP4-213ENST00000621748 MLLT1Q03111 559 aaPredicted RBP21.77■■□□□ 1.08
SCAMP4-213ENST00000621748 SHROOM1Q2M3G4 852 aaPredicted RBP21.77■■□□□ 1.08
SCAMP4-213ENST00000621748 SLFNL1Q499Z3 407 aa21.77■■□□□ 1.08
SCAMP4-213ENST00000621748 ZNF280CQ8ND82 737 aa21.77■■□□□ 1.08
SCAMP4-213ENST00000621748 USP17L5A8MUK1 530 aa21.76■■□□□ 1.07
SCAMP4-213ENST00000621748 ECM2O94769 699 aaPredicted RBP21.76■■□□□ 1.07
SCAMP4-213ENST00000621748 ARHGEF6Q15052 776 aa21.76■■□□□ 1.07
SCAMP4-213ENST00000621748 PARK7Q99497 189 aaKnown RBP21.76■■□□□ 1.07
SCAMP4-213ENST00000621748 TRIM34Q9BYJ4 488 aa21.76■■□□□ 1.07
SCAMP4-213ENST00000621748 GDF11O95390 407 aa21.75■■□□□ 1.07
SCAMP4-213ENST00000621748 CTGFP29279 349 aa21.75■■□□□ 1.07
SCAMP4-213ENST00000621748 SLC45A1Q9Y2W3 748 aa21.75■■□□□ 1.07
SCAMP4-213ENST00000621748 CHGBP05060 677 aa21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 ADD2P35612 726 aa21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 KIF22Q14807 665 aa21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 TREML2Q5T2D2 321 aa21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 CRBNQ96SW2 442 aa21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 TBC1D2Q9BYX2 928 aa21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 AGTPBP1Q9UPW5 1226 aa21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 SUPT16HQ9Y5B9 1047 aaKnown RBP21.74■■□□□ 1.07
SCAMP4-213ENST00000621748 MYH7P12883 1935 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 ASNSP08243 561 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 BCRP11274 1271 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 PLCD1P51178 756 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 HMGCS2P54868 508 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 LCORLQ8N3X6 602 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 WDR18Q9BV38 432 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 ECHDC1Q9NTX5 307 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 PTCH2Q9Y6C5 1203 aa21.73■■□□□ 1.07
SCAMP4-213ENST00000621748 KIAA0100Q14667 2235 aaKnown RBP21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 PSMC4P43686 418 aa21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 TTC6Q86TZ1 520 aa21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 PROCA1Q8NCQ7 364 aaPredicted RBP21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 TRIM47Q96LD4 638 aa21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 CRNKL1Q9BZJ0 848 aaKnown RBP21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 EHD4Q9H223 541 aa21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 ARMT1Q9H993 441 aa21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 AS3MTQ9HBK9 375 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms