RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 FMNL1O95466 1100 aaPredicted RBP29.32■■■□□ 2.28
ATXN3-253ENST00000621269 HOXD10P28358 340 aa29.32■■■□□ 2.28
ATXN3-253ENST00000621269 ADGRA1Q86SQ6 560 aa29.32■■■□□ 2.28
ATXN3-253ENST00000621269 TGFBRAP1Q8WUH2 860 aa29.32■■■□□ 2.28
ATXN3-253ENST00000621269 DDX19BQ9UMR2 479 aa29.32■■■□□ 2.28
ATXN3-253ENST00000621269 SLC45A1Q9Y2W3 748 aa29.32■■■□□ 2.28
ATXN3-253ENST00000621269 IDH1O75874 414 aaKnown RBP29.31■■■□□ 2.28
ATXN3-253ENST00000621269 CCDC84Q86UT8 332 aaPredicted RBP29.31■■■□□ 2.28
ATXN3-253ENST00000621269 MAPKAPK5Q8IW41 473 aa29.31■■■□□ 2.28
ATXN3-253ENST00000621269 CYP7A1P22680 504 aa29.3■■■□□ 2.28
ATXN3-253ENST00000621269 CAP2P40123 477 aa29.3■■■□□ 2.28
ATXN3-253ENST00000621269 RPAP2Q8IXW5 612 aaPredicted RBP29.3■■■□□ 2.28
ATXN3-253ENST00000621269 TRIM47Q96LD4 638 aa29.3■■■□□ 2.28
ATXN3-253ENST00000621269 COG6Q9Y2V7 657 aa29.3■■■□□ 2.28
ATXN3-253ENST00000621269 HMMRO75330 724 aa29.29■■■□□ 2.28
ATXN3-253ENST00000621269 TRIM34Q9BYJ4 488 aa29.29■■■□□ 2.28
ATXN3-253ENST00000621269 TBC1D2Q9BYX2 928 aa29.29■■■□□ 2.28
ATXN3-253ENST00000621269 CHMP4BQ9H444 224 aaKnown RBP29.29■■■□□ 2.28
ATXN3-253ENST00000621269 RCAN3Q9UKA8 241 aa29.29■■■□□ 2.28
ATXN3-253ENST00000621269 FLT1P17948 1338 aa29.28■■■□□ 2.28
ATXN3-253ENST00000621269 BCRP11274 1271 aa29.28■■■□□ 2.28
ATXN3-253ENST00000621269 CTGFP29279 349 aa29.28■■■□□ 2.28
ATXN3-253ENST00000621269 RHPN1Q8TCX5 695 aa29.28■■■□□ 2.28
ATXN3-253ENST00000621269 IL1RAPL2Q9NP60 686 aa29.28■■■□□ 2.28
ATXN3-253ENST00000621269 SRRDQ9UH36 339 aa29.28■■■□□ 2.28
ATXN3-253ENST00000621269 SPP2Q13103 211 aa29.27■■■□□ 2.28
ATXN3-253ENST00000621269 SLC4A8Q2Y0W8 1093 aa29.27■■■□□ 2.28
ATXN3-253ENST00000621269 CRACR2BQ8N4Y2 399 aaPredicted RBP29.27■■■□□ 2.28
ATXN3-253ENST00000621269 ZNF280CQ8ND82 737 aa29.27■■■□□ 2.28
ATXN3-253ENST00000621269 SMCR8Q8TEV9 937 aaPredicted RBP29.27■■■□□ 2.28
ATXN3-253ENST00000621269 SH3TC2Q8TF17 1288 aa29.27■■■□□ 2.28
ATXN3-253ENST00000621269 AGTPBP1Q9UPW5 1226 aa29.27■■■□□ 2.28
ATXN3-253ENST00000621269 ZSWIM8A7E2V4 1837 aa29.27■■■□□ 2.28
ATXN3-253ENST00000621269 USP17L5A8MUK1 530 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 MYCP01106 439 aaPredicted RBP29.26■■■□□ 2.27
ATXN3-253ENST00000621269 EN2P19622 333 aaPredicted RBP29.26■■■□□ 2.27
ATXN3-253ENST00000621269 OSBPP22059 807 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 FCGRTP55899 365 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 DYNLL1P63167 89 aaKnown RBP29.26■■■□□ 2.27
ATXN3-253ENST00000621269 MAP3K12Q12852 859 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 PRPF38BQ5VTL8 546 aaKnown RBP29.26■■■□□ 2.27
ATXN3-253ENST00000621269 CERS3Q8IU89 383 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 FOXP4Q8IVH2 680 aaPredicted RBP29.26■■■□□ 2.27
ATXN3-253ENST00000621269 MAGEB6Q8N7X4 407 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 RAET1EQ8TD07 263 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 ZBTB40Q9NUA8 1239 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 NDUFB9Q9Y6M9 179 aa29.26■■■□□ 2.27
ATXN3-253ENST00000621269 APBB1O00213 710 aa29.25■■■□□ 2.27
ATXN3-253ENST00000621269 RRP1BQ14684 758 aaKnown RBP29.25■■■□□ 2.27
ATXN3-253ENST00000621269 CLASRPQ8N2M8 674 aaKnown RBP29.25■■■□□ 2.27
ATXN3-253ENST00000621269 PROCA1Q8NCQ7 364 aaPredicted RBP29.25■■■□□ 2.27
ATXN3-253ENST00000621269 KIF1BPQ96EK5 621 aa29.25■■■□□ 2.27
ATXN3-253ENST00000621269 AS3MTQ9HBK9 375 aa29.25■■■□□ 2.27
ATXN3-253ENST00000621269 PALD1Q9ULE6 856 aa29.25■■■□□ 2.27
ATXN3-253ENST00000621269 MYPNQ86TC9 1320 aa29.24■■■□□ 2.27
ATXN3-253ENST00000621269 HLA-DOAP06340 250 aa29.24■■■□□ 2.27
ATXN3-253ENST00000621269 TMED8Q6PL24 325 aaPredicted RBP29.24■■■□□ 2.27
ATXN3-253ENST00000621269 MIGA1Q8NAN2 632 aa29.24■■■□□ 2.27
ATXN3-253ENST00000621269 ANTXR1Q9H6X2 564 aa29.24■■■□□ 2.27
ATXN3-253ENST00000621269 SAP30BPQ9UHR5 308 aaKnown RBP29.24■■■□□ 2.27
ATXN3-253ENST00000621269 PNMA3Q9UL41 463 aa29.24■■■□□ 2.27
ATXN3-253ENST00000621269 PHIPQ8WWQ0 1821 aa29.24■■■□□ 2.27
ATXN3-253ENST00000621269 CENPFP49454 3210 aa29.24■■■□□ 2.27
ATXN3-253ENST00000621269 TREML2Q5T2D2 321 aa29.23■■■□□ 2.27
ATXN3-253ENST00000621269 RBBP6Q7Z6E9 1792 aaKnown RBP29.22■■■□□ 2.27
ATXN3-253ENST00000621269 IFIT2P09913 472 aaKnown RBP29.22■■■□□ 2.27
ATXN3-253ENST00000621269 USP5P45974 858 aa29.22■■■□□ 2.27
ATXN3-253ENST00000621269 PABPC4Q13310 644 aaKnown RBP eCLIP29.22■■■□□ 2.27
ATXN3-253ENST00000621269 TTF1Q15361 905 aaPredicted RBP29.22■■■□□ 2.27
ATXN3-253ENST00000621269 ASNSP08243 561 aa29.21■■■□□ 2.27
ATXN3-253ENST00000621269 HMGCS2P54868 508 aa29.21■■■□□ 2.27
ATXN3-253ENST00000621269 METTL16Q86W50 562 aaKnown RBP29.21■■■□□ 2.27
ATXN3-253ENST00000621269 BCL11AQ9H165 835 aa29.21■■■□□ 2.27
ATXN3-253ENST00000621269 RAB11FIP3O75154 756 aa29.2■■■□□ 2.26
ATXN3-253ENST00000621269 GRK4P32298 578 aa29.2■■■□□ 2.26
ATXN3-253ENST00000621269 SIRT2Q8IXJ6 389 aa29.2■■■□□ 2.26
ATXN3-253ENST00000621269 MYO5AQ9Y4I1 1855 aaKnown RBP29.2■■■□□ 2.26
ATXN3-253ENST00000621269 PRKCZQ05513 592 aa29.19■■■□□ 2.26
ATXN3-253ENST00000621269 WDR18Q9BV38 432 aa29.19■■■□□ 2.26
ATXN3-253ENST00000621269 DNAJC18Q9H819 358 aa29.19■■■□□ 2.26
ATXN3-253ENST00000621269 GINM1Q9NU53 330 aa29.19■■■□□ 2.26
ATXN3-253ENST00000621269 PTPRFP10586 1907 aa29.18■■■□□ 2.26
ATXN3-253ENST00000621269 SH3D19Q5HYK7 790 aa29.18■■■□□ 2.26
ATXN3-253ENST00000621269 ANKRD13CQ8N6S4 541 aa29.18■■■□□ 2.26
ATXN3-253ENST00000621269 BIN2Q9UBW5 565 aaPredicted RBP29.18■■■□□ 2.26
ATXN3-253ENST00000621269 ATAD5Q96QE3 1844 aa29.17■■■□□ 2.26
ATXN3-253ENST00000621269 TNPO2O14787 897 aaKnown RBP29.17■■■□□ 2.26
ATXN3-253ENST00000621269 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.17■■■□□ 2.26
ATXN3-253ENST00000621269 TMOD4Q9NZQ9 345 aa29.17■■■□□ 2.26
ATXN3-253ENST00000621269 FOCADQ5VW36 1801 aa29.17■■■□□ 2.26
ATXN3-253ENST00000621269 GDF11O95390 407 aa29.16■■■□□ 2.26
ATXN3-253ENST00000621269 MTMR2Q13614 643 aa29.16■■■□□ 2.26
ATXN3-253ENST00000621269 DNAJC2Q99543 621 aaKnown RBP29.16■■■□□ 2.26
ATXN3-253ENST00000621269 SIPA1L1O43166 1804 aa29.15■■■□□ 2.26
ATXN3-253ENST00000621269 CDK5RAP2Q96SN8 1893 aa29.15■■■□□ 2.26
ATXN3-253ENST00000621269 GCLCP48506 637 aaPredicted RBP29.15■■■□□ 2.26
ATXN3-253ENST00000621269 BACE1P56817 501 aa29.15■■■□□ 2.26
ATXN3-253ENST00000621269 JAG1P78504 1218 aa29.15■■■□□ 2.26
ATXN3-253ENST00000621269 PDE3AQ14432 1141 aa29.15■■■□□ 2.26
ATXN3-253ENST00000621269 SLC9C2Q5TAH2 1124 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms