RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 RILPQ96NA2 401 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 NYXQ9GZU5 481 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 MRPL46Q9H2W6 279 aaKnown RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 BCS1LQ9Y276 419 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 RBM8AQ9Y5S9 174 aaKnown RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 SHANK2Q9UPX8 1470 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 A0A1B0GVL5 298 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 ACTN4O43707 911 aaKnown RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 ZNF75DP51815 510 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 CYP26C1Q6V0L0 522 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 SMC5Q8IY18 1101 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 ESYT1Q9BSJ8 1104 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 MAK16Q9BXY0 300 aaKnown RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 ZBTB43O43298 467 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 CCDC14Q49A88 953 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 GOLGA5Q8TBA6 731 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 HLA-DOAP06340 250 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 MYL5Q02045 173 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 PPP1R9AQ9ULJ8 1098 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 PPFIA2O75334 1257 aa11.02□□□□□ -0.64
COL4A6-210ENST00000621266 ATICP31939 592 aa11.02□□□□□ -0.64
COL4A6-210ENST00000621266 WTAPQ15007 396 aa11.02□□□□□ -0.64
COL4A6-210ENST00000621266 PHLDB3Q6NSJ2 640 aa11.02□□□□□ -0.64
COL4A6-210ENST00000621266 HEATR3Q7Z4Q2 680 aa11.02□□□□□ -0.64
COL4A6-210ENST00000621266 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.64
COL4A6-210ENST00000621266 RRP15Q9Y3B9 282 aaKnown RBP11.02□□□□□ -0.64
COL4A6-210ENST00000621266 NBPF7P0C2Y1 421 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-210ENST00000621266 GUCY2FP51841 1108 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 EIF4A2Q14240 407 aaKnown RBP11.02□□□□□ -0.65
COL4A6-210ENST00000621266 DCAF17Q5H9S7 520 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-210ENST00000621266 FAM182BQ5T319 152 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 FLT4P35916 1363 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 ATP10AO60312 1499 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 SMARCC2Q8TAQ2 1214 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 LDHCP07864 332 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 AK2P54819 239 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 POLE2P56282 527 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 TUBB2AQ13885 445 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 TUBB2BQ9BVA1 445 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 CAPS2Q9BXY5 557 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 ABCC2Q92887 1545 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 I3L4J1 428 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 ANKRD20A3Q5VUR7 823 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 BCAS4Q8TDM0 211 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 VCX3AQ9NNX9 186 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 CHPF2Q9P2E5 772 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 AGTPBP1Q9UPW5 1226 aa11.02□□□□□ -0.65
COL4A6-210ENST00000621266 CCT5P48643 541 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 ITIH3Q06033 890 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 POLKQ9UBT6 870 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 NSFL1CQ9UNZ2 370 aaKnown RBP11.01□□□□□ -0.65
COL4A6-210ENST00000621266 EIF2AK4Q9P2K8 1649 aaKnown RBP11.01□□□□□ -0.65
COL4A6-210ENST00000621266 MAPKBP1O60336 1514 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 SPOPO43791 374 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 RASSF2P50749 326 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 SH3BGRP55822 239 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-210ENST00000621266 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 POLR3AO14802 1390 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-210ENST00000621266 PAK2Q13177 524 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 RTN1Q16799 776 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 KRT71Q3SY84 523 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
COL4A6-210ENST00000621266 CBX8Q9HC52 389 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 PPFIA4O75335 1185 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 PPP2R5CQ13362 524 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 ERMNQ8TAM6 284 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 N4BP2L2Q92802 583 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-210ENST00000621266 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 JPH2Q9BR39 696 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-210ENST00000621266 PLCB1Q9NQ66 1216 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 TRIM37O94972 964 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 BMP15O95972 392 aa11.01□□□□□ -0.65
COL4A6-210ENST00000621266 KRT15P19012 456 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 FANCCQ00597 558 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 ZNF804AQ7Z570 1209 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 NOC4LQ9BVI4 516 aaKnown RBP11□□□□□ -0.65
COL4A6-210ENST00000621266 ABCC1P33527 1531 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 GAS8O95995 478 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 ALDH1L1O75891 902 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 KLHDC4Q8TBB5 520 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 XAGE3Q8WTP9 111 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 CEP104O60308 925 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 SEC24BO95487 1268 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 GCP02774 474 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 SLC24A3Q9HC58 644 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 RNF40O75150 1001 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 UQCRFS1P1P0C7P4 283 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 DENND2CQ68D51 928 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 USP37Q86T82 979 aa11□□□□□ -0.65
COL4A6-210ENST00000621266 FAM170AA1A519 330 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 H0YIN7 160 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 STX2P32856 288 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 IFIT1BQ5T764 474 aaKnown RBP10.99□□□□□ -0.65
COL4A6-210ENST00000621266 ASIC3Q9UHC3 531 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 PARD3Q8TEW0 1356 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 BAG3O95817 575 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms