RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 VPS37DQ86XT2 251 aa5.63□□□□□ -1.51
MALAT1-216ENST00000620465 REXO1Q8N1G1 1221 aaKnown RBP5.63□□□□□ -1.51
MALAT1-216ENST00000620465 ARMC10Q8N2F6 343 aa5.63□□□□□ -1.51
MALAT1-216ENST00000620465 SLC43A3Q8NBI5 491 aa5.63□□□□□ -1.51
MALAT1-216ENST00000620465 WNT10AQ9GZT5 417 aa5.63□□□□□ -1.51
MALAT1-216ENST00000620465 ACSS3Q9H6R3 686 aa5.63□□□□□ -1.51
MALAT1-216ENST00000620465 BRMS1Q9HCU9 246 aa5.63□□□□□ -1.51
MALAT1-216ENST00000620465 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
MALAT1-216ENST00000620465 GRIN3BO60391 1043 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 RNGTTO60942 597 aaKnown RBP5.62□□□□□ -1.51
MALAT1-216ENST00000620465 ITGB2P05107 769 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 MAP4P27816 1152 aaKnown RBP5.62□□□□□ -1.51
MALAT1-216ENST00000620465 NTF4P34130 210 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 CDPF1Q6NVV7 123 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 FAM20CQ8IXL6 584 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 SMYD4Q8IYR2 804 aaPredicted RBP5.62□□□□□ -1.51
MALAT1-216ENST00000620465 KCT2Q8NC54 265 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 ZNF507Q8TCN5 953 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 FBLIM1Q8WUP2 373 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 ISL2Q96A47 359 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 TP53INP1Q96A56 240 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 SEC16BQ96JE7 1060 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 GINM1Q9NU53 330 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 ADAM30Q9UKF2 790 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 EFR3BQ9Y2G0 817 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 PRR36Q9H6K5 1346 aa5.62□□□□□ -1.51
MALAT1-216ENST00000620465 HTR3BO95264 441 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 PGRP06401 933 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 ATF4P18848 351 aaPredicted RBP5.61□□□□□ -1.51
MALAT1-216ENST00000620465 PLCG1P19174 1290 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 RXRBP28702 533 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 SOX9P48436 509 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 NASPP49321 788 aaPredicted RBP5.61□□□□□ -1.51
MALAT1-216ENST00000620465 ARID5AQ03989 594 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 MAP7Q14244 749 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 GK5Q6ZS86 529 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 CDC37L1Q7L3B6 337 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 EZH1Q92800 747 aaPredicted RBP5.61□□□□□ -1.51
MALAT1-216ENST00000620465 FERD3LQ96RJ6 166 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 KCNF1Q9H3M0 494 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 SEMA6CQ9H3T2 930 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 SSU72Q9NP77 194 aaKnown RBP5.61□□□□□ -1.51
MALAT1-216ENST00000620465 REV1Q9UBZ9 1251 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 STRIP2Q9ULQ0 834 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 DAGLAQ9Y4D2 1042 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 PCDHB14Q9Y5E9 798 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
MALAT1-216ENST00000620465 FAM95CA0A1B0GW59 222 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 ATE1O95260 518 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 NFICP08651 508 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 IMPDH2P12268 514 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 DNAJA1P31689 397 aaKnown RBP5.6□□□□□ -1.51
MALAT1-216ENST00000620465 CLCQ05315 142 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 MLECQ14165 292 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 BEND4Q6ZU67 534 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 HID1Q8IV36 788 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.6□□□□□ -1.51
MALAT1-216ENST00000620465 GMLQ99445 158 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 EHMT1Q9H9B1 1298 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 TPSG1Q9NRR2 321 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 PCOLCE2Q9UKZ9 415 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 ZNRF3Q9ULT6 936 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 PPT2Q9UMR5 302 aa5.6□□□□□ -1.51
MALAT1-216ENST00000620465 MSTNO14793 375 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 TMEM201Q5SNT2 666 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 PAOXQ6QHF9 649 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 PRR23CQ6ZRP0 262 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 CLEC10AQ8IUN9 316 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 SPOCK3Q9BQ16 436 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.59□□□□□ -1.51
MALAT1-216ENST00000620465 FBRSQ9HAH7 460 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 RAXQ9Y2V3 346 aa5.59□□□□□ -1.51
MALAT1-216ENST00000620465 PROCP04070 461 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 FGRP09769 529 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 CAP2P40123 477 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 YARSP54577 528 aaKnown RBP5.58□□□□□ -1.52
MALAT1-216ENST00000620465 SF3A1Q15459 793 aaKnown RBP5.58□□□□□ -1.52
MALAT1-216ENST00000620465 LRRFIP1Q32MZ4 808 aaKnown RBP5.58□□□□□ -1.52
MALAT1-216ENST00000620465 FBXW10Q5XX13 1052 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 GPAT2Q6NUI2 795 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 CCDC81Q6ZN84 652 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 UBE3DQ7Z6J8 389 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 MRPL41Q8IXM3 137 aaKnown RBP5.58□□□□□ -1.52
MALAT1-216ENST00000620465 CPLX3Q8WVH0 158 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 ACSF2Q96CM8 615 aaPredicted RBP5.58□□□□□ -1.52
MALAT1-216ENST00000620465 TMEM87BQ96K49 555 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 FAM83CQ9BQN1 747 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 SRRTQ9BXP5 876 aaKnown RBP5.58□□□□□ -1.52
MALAT1-216ENST00000620465 C7orf69Q9H7B7 122 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 GMIPQ9P107 970 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 STOML1Q9UBI4 398 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 TJP2Q9UDY2 1190 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 KLHL3Q9UH77 587 aa5.58□□□□□ -1.52
MALAT1-216ENST00000620465 MEIS3P2A8K0S8 358 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 LRIG2O94898 1065 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 IGHA1P01876 353 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 SSBP05455 408 aaKnown RBP eCLIP5.57□□□□□ -1.52
MALAT1-216ENST00000620465 DOC2BQ14184 412 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 NFKBIBQ15653 356 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 NKG7Q16617 165 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms