RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 MRPL44Q9H9J2 332 aaKnown RBP18.36■□□□□ 0.53
DKC1-213ENST00000620277 SUGCTQ9HAC7 445 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 ZBTB1Q9Y2K1 713 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 C1orf167Q5SNV9 1468 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 KIF2AO00139 706 aaPredicted RBP18.36■□□□□ 0.53
DKC1-213ENST00000620277 WNT7AO00755 349 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 RHOXF2BP0C7M4 288 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 RTN1Q16799 776 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 PIGBQ92521 554 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 STRBPQ96SI9 672 aaKnown RBP18.36■□□□□ 0.53
DKC1-213ENST00000620277 RHOXF2Q9BQY4 288 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
DKC1-213ENST00000620277 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
DKC1-213ENST00000620277 SASH3O75995 380 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 RASGRF1Q13972 1273 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 NTRK3Q16288 839 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 CCDC93Q567U6 631 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 ISCA1Q9BUE6 129 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 PODXL2Q9NZ53 605 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 TFR2Q9UP52 801 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 PPP2R3AQ06190 1150 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 WTAPQ15007 396 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
DKC1-213ENST00000620277 MED15Q96RN5 788 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.536e-7■■■■□ 20.4
DKC1-213ENST00000620277 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 TMEM94Q12767 1356 aa18.35■□□□□ 0.53
DKC1-213ENST00000620277 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
DKC1-213ENST00000620277 TRIM22Q8IYM9 498 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 MPHOSPH8Q99549 860 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 ARGLU1Q9NWB6 273 aaPredicted RBP18.34■□□□□ 0.53
DKC1-213ENST00000620277 HPSEQ9Y251 543 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 IL2RBP14784 551 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 GDAP1L1Q96MZ0 367 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 ERICH2A1L162 156 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 IKBKBO14920 756 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 PDE8BO95263 885 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 TC2NQ8N9U0 490 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 VPS16Q9H269 839 aa18.34■□□□□ 0.53
DKC1-213ENST00000620277 RFX7Q2KHR2 1363 aa18.33■□□□□ 0.53
DKC1-213ENST00000620277 V9GY48 417 aaPredicted RBP18.33■□□□□ 0.53
DKC1-213ENST00000620277 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.52
DKC1-213ENST00000620277 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.52
DKC1-213ENST00000620277 A0A087X0B3 334 aa18.33■□□□□ 0.52
DKC1-213ENST00000620277 CUTAO60888 179 aa18.33■□□□□ 0.52
DKC1-213ENST00000620277 CTSWP56202 376 aa18.33■□□□□ 0.52
DKC1-213ENST00000620277 AKAP17AQ02040 695 aaKnown RBP18.33■□□□□ 0.52
DKC1-213ENST00000620277 SPATA5Q8NB90 893 aa18.33■□□□□ 0.52
DKC1-213ENST00000620277 TEX13AQ9BXU3 409 aaPredicted RBP18.33■□□□□ 0.52
DKC1-213ENST00000620277 ZSCAN12O43309 604 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 OAS2P29728 719 aaKnown RBP18.32■□□□□ 0.52
DKC1-213ENST00000620277 RBL2Q08999 1139 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 ZNF569Q5MCW4 686 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 SPECC1LQ69YQ0 1117 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 ACRBPQ8NEB7 543 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 CDC5LQ99459 802 aaKnown RBP18.32■□□□□ 0.52
DKC1-213ENST00000620277 UBAC1Q9BSL1 405 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 PARD6BQ9BYG5 372 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 RAI14Q9P0K7 980 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 TADA3O75528 432 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
DKC1-213ENST00000620277 ERCC3P19447 782 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 BPIFA3Q9BQP9 254 aa18.32■□□□□ 0.52
DKC1-213ENST00000620277 CD44P16070 742 aaKnown RBP18.31■□□□□ 0.52
DKC1-213ENST00000620277 HNRNPH2P55795 449 aaKnown RBP18.31■□□□□ 0.52
DKC1-213ENST00000620277 KCNQ4P56696 695 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 FER1L4A9Z1Z3 1794 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 MRC1P22897 1456 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 NMT2O60551 498 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 IGSF22Q8N9C0 903 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 ARHGAP6O43182 974 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 PPP6R2O75170 966 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 MAP3K12Q12852 859 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 KIF4BQ2VIQ3 1234 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 BICDL1Q6ZP65 573 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 PPFIBP1Q86W92 1011 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 TMEM139Q8IV31 216 aa18.31■□□□□ 0.52
DKC1-213ENST00000620277 GSG1L2A8MUP6 293 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 STARD3NLO95772 234 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 MMP1P03956 469 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
DKC1-213ENST00000620277 ACSBG1Q96GR2 724 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 CPDO75976 1380 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 CYP7A1P22680 504 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 CASP14P31944 242 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 RAD9BQ6WBX8 426 aa18.3■□□□□ 0.52
DKC1-213ENST00000620277 FBXO2Q9UK22 296 aaPredicted RBP18.3■□□□□ 0.52
DKC1-213ENST00000620277 PATL2C9JE40 543 aaKnown RBP18.29■□□□□ 0.52
DKC1-213ENST00000620277 GYG1P46976 350 aa18.29■□□□□ 0.52
DKC1-213ENST00000620277 LMAN1P49257 510 aa18.29■□□□□ 0.52
DKC1-213ENST00000620277 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
DKC1-213ENST00000620277 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
DKC1-213ENST00000620277 CTNND2Q9UQB3 1225 aa18.29■□□□□ 0.52
DKC1-213ENST00000620277 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
DKC1-213ENST00000620277 ANKRD65E5RJM6 399 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms