RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 EVX2Q03828 476 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 MSL1Q68DK7 614 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 CERS3Q8IU89 383 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 MASTLQ96GX5 879 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 AIFM3Q96NN9 605 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 MROH7-TTC4A0A0A0MT08 1334 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 ANKRD31Q8N7Z5 1873 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 PDE4BQ07343 736 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 PPP2R5BQ15173 497 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 MPNDQ8N594 471 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 SLC26A6Q9BXS9 759 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 FTOQ9C0B1 505 aaKnown RBP eCLIP22.16■■□□□ 1.14
PSPC1-206ENST00000619300 DUOX1Q9NRD9 1551 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 FAM205AQ6ZU69 1335 aa22.15■■□□□ 1.14
PSPC1-206ENST00000619300 USP17L8P0C7I0 530 aa22.15■■□□□ 1.14
PSPC1-206ENST00000619300 MFSD14BQ5SR56 506 aa22.15■■□□□ 1.14
PSPC1-206ENST00000619300 POTEAQ6S8J7 498 aa22.15■■□□□ 1.14
PSPC1-206ENST00000619300 RTFDC1Q9BY42 306 aaPredicted RBP22.15■■□□□ 1.14
PSPC1-206ENST00000619300 COA1Q9GZY4 146 aa22.15■■□□□ 1.14
PSPC1-206ENST00000619300 POLR3DP05423 398 aaPredicted RBP22.14■■□□□ 1.14
PSPC1-206ENST00000619300 KIF23Q02241 960 aaPredicted RBP22.14■■□□□ 1.14
PSPC1-206ENST00000619300 IFIT1BQ5T764 474 aaKnown RBP22.14■■□□□ 1.14
PSPC1-206ENST00000619300 C12orf60Q5U649 245 aa22.14■■□□□ 1.14
PSPC1-206ENST00000619300 KRT40Q6A162 431 aa22.14■■□□□ 1.14
PSPC1-206ENST00000619300 NUP133Q8WUM0 1156 aa22.14■■□□□ 1.14
PSPC1-206ENST00000619300 WASF1Q92558 559 aa22.14■■□□□ 1.14
PSPC1-206ENST00000619300 ANP32BQ92688 251 aaKnown RBP22.14■■□□□ 1.14
PSPC1-206ENST00000619300 RTEL1Q9NZ71 1219 aa22.14■■□□□ 1.14
PSPC1-206ENST00000619300 LRRC37AA6NMS7 1700 aa22.14■■□□□ 1.14
PSPC1-206ENST00000619300 KIAA1551Q9HCM1 1747 aa22.14■■□□□ 1.13
PSPC1-206ENST00000619300 FAM163AQ96GL9 167 aaPredicted RBP22.14■■□□□ 1.13
PSPC1-206ENST00000619300 ZC3H12CQ9C0D7 883 aaKnown RBP22.14■■□□□ 1.13
PSPC1-206ENST00000619300 GPR75-ASB3A0A0A6YYF3 556 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 RIMBP2O15034 1052 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 SLF2Q8IX21 1173 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 TRIM22Q8IYM9 498 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 CRACR2BQ8N4Y2 399 aaPredicted RBP22.13■■□□□ 1.13
PSPC1-206ENST00000619300 BICD2Q8TD16 824 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 TMX4Q9H1E5 349 aaPredicted RBP22.13■■□□□ 1.13
PSPC1-206ENST00000619300 LTBP1Q14766 1721 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 KIF28PB7ZC32 967 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 TRIM29Q14134 588 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 MYSM1Q5VVJ2 828 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 CATIPQ7Z7H3 387 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 NBPF11Q86T75 865 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 TGFBRAP1Q8WUH2 860 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 DACT1Q9NYF0 836 aa22.13■■□□□ 1.13
PSPC1-206ENST00000619300 TNS1Q9HBL0 1735 aaKnown RBP22.12■■□□□ 1.13
PSPC1-206ENST00000619300 BTDP43251 543 aa22.12■■□□□ 1.13
PSPC1-206ENST00000619300 NT5C2P49902 561 aa22.12■■□□□ 1.13
PSPC1-206ENST00000619300 OLFM4Q6UX06 510 aa22.12■■□□□ 1.13
PSPC1-206ENST00000619300 DPP8Q6V1X1 898 aaPredicted RBP22.12■■□□□ 1.13
PSPC1-206ENST00000619300 DDX19AQ9NUU7 478 aaKnown RBP22.12■■□□□ 1.13
PSPC1-206ENST00000619300 PLCG2P16885 1265 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 GTF2IP78347 998 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 SLC15A2Q16348 729 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 AMOTL1Q8IY63 956 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 CAMKK2Q96RR4 588 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 NUP62CLQ9H1M0 184 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 EZH2Q15910 746 aaKnown RBP22.11■■□□□ 1.13
PSPC1-206ENST00000619300 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 ZNF622Q969S3 477 aaKnown RBP eCLIP22.11■■□□□ 1.132e-7■■■□□ 15.9
PSPC1-206ENST00000619300 POLR3EQ9NVU0 708 aa22.11■■□□□ 1.13
PSPC1-206ENST00000619300 UBE2Q2LH0YL09 131 aa22.1■■□□□ 1.13
PSPC1-206ENST00000619300 CALM1P0DP23 149 aa22.1■■□□□ 1.13
PSPC1-206ENST00000619300 CALM2P0DP24 149 aa22.1■■□□□ 1.13
PSPC1-206ENST00000619300 CALM3P0DP25 149 aa22.1■■□□□ 1.13
PSPC1-206ENST00000619300 RNF214Q8ND24 703 aa22.1■■□□□ 1.13
PSPC1-206ENST00000619300 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
PSPC1-206ENST00000619300 TSPY2A6NKD2 308 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 NR1I2O75469 434 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 DEXIO95424 95 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 GUCY1A2P33402 732 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 EN1Q05925 392 aaPredicted RBP22.09■■□□□ 1.13
PSPC1-206ENST00000619300 CCDC173Q0VFZ6 552 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 TROAPQ12815 778 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 C2CD5Q86YS7 1000 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 CCDC82Q8N4S0 544 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 LINC00301Q8NCQ3 95 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 FUCA2Q9BTY2 467 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 SUGT1Q9Y2Z0 365 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 CLIC4Q9Y696 253 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 GAKO14976 1311 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 RGPD3A6NKT7 1758 aaPredicted RBP22.09■■□□□ 1.13
PSPC1-206ENST00000619300 RGPD4Q7Z3J3 1758 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 YEATS4O95619 227 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 U2AF2P26368 475 aaKnown RBP eCLIP22.09■■□□□ 1.139e-7■■■■□ 19.4
PSPC1-206ENST00000619300 ME1P48163 572 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 SLC4A8Q2Y0W8 1093 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 CMTR1Q8N1G2 835 aaKnown RBP22.09■■□□□ 1.13
PSPC1-206ENST00000619300 PPP1R9BQ96SB3 815 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 RBM28Q9NW13 759 aaKnown RBP22.09■■□□□ 1.13
PSPC1-206ENST00000619300 MYH2Q9UKX2 1941 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 MYH15Q9Y2K3 1946 aa22.09■■□□□ 1.13
PSPC1-206ENST00000619300 H0YIN7 160 aa22.08■■□□□ 1.13
PSPC1-206ENST00000619300 NMT2O60551 498 aa22.08■■□□□ 1.13
PSPC1-206ENST00000619300 DDAH1O94760 285 aa22.08■■□□□ 1.13
PSPC1-206ENST00000619300 CAMK4Q16566 473 aa22.08■■□□□ 1.13
PSPC1-206ENST00000619300 MAP3K11Q16584 847 aa22.08■■□□□ 1.13
PSPC1-206ENST00000619300 MAPKAPK5Q8IW41 473 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms