RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 TIGD1Q96MW7 591 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
TP53-223ENST00000618944 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.91□□□□□ -0.34
TP53-223ENST00000618944 MYH7P12883 1935 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 FANCCQ00597 558 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 PTPN14Q15678 1187 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 KRI1Q8N9T8 703 aaKnown RBP12.9□□□□□ -0.34
TP53-223ENST00000618944 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
TP53-223ENST00000618944 CABP5Q9NP86 173 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 TUBE1Q9UJT0 475 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.34
TP53-223ENST00000618944 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
TP53-223ENST00000618944 C4AP0C0L4 1744 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 GSDMDP57764 484 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 EVX2Q03828 476 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 TMTC2Q8N394 836 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 PDILTQ8N807 584 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 CCDC112Q8NEF3 446 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 DPF2Q92785 391 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 HSD3B7Q9H2F3 369 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 PRDM10Q9NQV6 1147 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 GNL3LQ9NVN8 582 aaKnown RBP12.89□□□□□ -0.35
TP53-223ENST00000618944 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 MYH3P11055 1940 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 TNKSO95271 1327 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
TP53-223ENST00000618944 CTIFO43310 598 aaKnown RBP12.89□□□□□ -0.35
TP53-223ENST00000618944 DEXIO95424 95 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 SERPINC1P01008 464 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 KLRK1P26718 216 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 CAVIN4Q5BKX8 364 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 GRAMD1CQ8IYS0 662 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 CCAR2Q8N163 923 aaKnown RBP12.89□□□□□ -0.35
TP53-223ENST00000618944 ESR2Q92731 530 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 CELF1Q92879 486 aaKnown RBP12.89□□□□□ -0.35
TP53-223ENST00000618944 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 PAXBP1Q9Y5B6 917 aa12.89□□□□□ -0.35
TP53-223ENST00000618944 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
TP53-223ENST00000618944 CCDC196A0A1B0GTZ2 297 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 UBASH3AP57075 661 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 PDE4BQ07343 736 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 FAM84BQ96KN1 310 aaPredicted RBP12.88□□□□□ -0.35
TP53-223ENST00000618944 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
TP53-223ENST00000618944 FANCLQ9NW38 375 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 TFCP2L1Q9NZI6 479 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 IMPACTQ9P2X3 320 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 JAG2Q9Y219 1238 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
TP53-223ENST00000618944 ANKRD36CQ5JPF3 1778 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 BMP6P22004 513 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 ZNF384Q8TF68 577 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 RIOK1Q9BRS2 568 aaKnown RBP12.88□□□□□ -0.35
TP53-223ENST00000618944 FOXP1Q9H334 677 aaPredicted RBP12.88□□□□□ -0.35
TP53-223ENST00000618944 SERTAD1Q9UHV2 236 aa12.88□□□□□ -0.35
TP53-223ENST00000618944 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
TP53-223ENST00000618944 FAM237AA0A1B0GTK4 181 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 IKBKBO14920 756 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 COL4A1P02462 1669 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
TP53-223ENST00000618944 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
TP53-223ENST00000618944 MYL5Q02045 173 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 GOLGA8FQ08AF8 430 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 GOLGA8DPQ0D2H9 430 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 SEC23AQ15436 765 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 PDCL2Q8N4E4 241 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
TP53-223ENST00000618944 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 ZSCAN10Q96SZ4 725 aaPredicted RBP12.87□□□□□ -0.35
TP53-223ENST00000618944 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
TP53-223ENST00000618944 FBXO2Q9UK22 296 aaPredicted RBP12.87□□□□□ -0.35
TP53-223ENST00000618944 PTPREP23469 700 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
TP53-223ENST00000618944 ZNF827Q17R98 1081 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 CFAP100Q494V2 611 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 TBC1D9BQ66K14 1250 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
TP53-223ENST00000618944 CCDC94Q9BW85 323 aaPredicted RBP12.87□□□□□ -0.35
TP53-223ENST00000618944 RTL9Q8NET4 1388 aa12.86□□□□□ -0.35
TP53-223ENST00000618944 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
TP53-223ENST00000618944 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
TP53-223ENST00000618944 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
TP53-223ENST00000618944 USP17L21D6R901 530 aa12.86□□□□□ -0.35
TP53-223ENST00000618944 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms