RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 LDHCP07864 332 aa29.51■■■□□ 2.31
VEGFC-202ENST00000618562 FGRP09769 529 aa29.51■■■□□ 2.31
VEGFC-202ENST00000618562 CDK5RAP2Q96SN8 1893 aa29.51■■■□□ 2.31
VEGFC-202ENST00000618562 FDPSP14324 419 aaKnown RBP29.51■■■□□ 2.31
VEGFC-202ENST00000618562 GTF2IP78347 998 aa29.51■■■□□ 2.31
VEGFC-202ENST00000618562 ZKSCAN3Q9BRR0 538 aa29.51■■■□□ 2.31
VEGFC-202ENST00000618562 MTA3Q9BTC8 594 aa29.51■■■□□ 2.31
VEGFC-202ENST00000618562 MKRN1Q9UHC7 482 aaKnown RBP29.51■■■□□ 2.31
VEGFC-202ENST00000618562 SBK1Q52WX2 424 aa29.5■■■□□ 2.31
VEGFC-202ENST00000618562 RBM43Q6ZSC3 357 aaKnown RBP29.5■■■□□ 2.31
VEGFC-202ENST00000618562 DACT1Q9NYF0 836 aa29.5■■■□□ 2.31
VEGFC-202ENST00000618562 ARPP21Q9UBL0 812 aaPredicted RBP29.5■■■□□ 2.31
VEGFC-202ENST00000618562 BAG3O95817 575 aa29.49■■■□□ 2.31
VEGFC-202ENST00000618562 NFXL1Q6ZNB6 911 aa29.49■■■□□ 2.31
VEGFC-202ENST00000618562 ESR2Q92731 530 aa29.49■■■□□ 2.31
VEGFC-202ENST00000618562 METAP2P50579 478 aaKnown RBP eCLIP29.49■■■□□ 2.31
VEGFC-202ENST00000618562 TERF1P54274 439 aa29.49■■■□□ 2.31
VEGFC-202ENST00000618562 TNMDQ9H2S6 317 aa29.49■■■□□ 2.31
VEGFC-202ENST00000618562 TPM2P07951 284 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 CYP2D6P10635 497 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 PCP11498 1178 aaKnown RBP29.48■■■□□ 2.31
VEGFC-202ENST00000618562 RXRAP19793 462 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 SART3Q15020 963 aaKnown RBP29.48■■■□□ 2.31
VEGFC-202ENST00000618562 ATL3Q6DD88 541 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 CLSTN2Q9H4D0 955 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 ZBTB43O43298 467 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 DOK7Q18PE1 504 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 MICU3Q86XE3 530 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 PGBD1Q96JS3 809 aa29.48■■■□□ 2.31
VEGFC-202ENST00000618562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.48■■■□□ 2.31
VEGFC-202ENST00000618562 NAV1Q8NEY1 1877 aa29.47■■■□□ 2.31
VEGFC-202ENST00000618562 CPLX1O14810 134 aa29.47■■■□□ 2.31
VEGFC-202ENST00000618562 FAM200AQ8TCP9 573 aa29.47■■■□□ 2.31
VEGFC-202ENST00000618562 CNKSR1Q969H4 720 aa29.47■■■□□ 2.31
VEGFC-202ENST00000618562 NOL10Q9BSC4 688 aaKnown RBP29.47■■■□□ 2.31
VEGFC-202ENST00000618562 MYL10Q9BUA6 226 aa29.47■■■□□ 2.31
VEGFC-202ENST00000618562 MCM9Q9NXL9 1143 aa29.47■■■□□ 2.31
VEGFC-202ENST00000618562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.47■■■□□ 2.31
VEGFC-202ENST00000618562 GPR75-ASB3A0A0A6YYF3 556 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 PRDM1O75626 825 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 BTDP43251 543 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 USP5P45974 858 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 WTAPQ15007 396 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 FAM163AQ96GL9 167 aaPredicted RBP29.46■■■□□ 2.31
VEGFC-202ENST00000618562 SLC12A7Q9Y666 1083 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 CCDC69A6NI79 296 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 USP17L8P0C7I0 530 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 CDC27P30260 824 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 ADD1P35611 737 aaKnown RBP29.46■■■□□ 2.31
VEGFC-202ENST00000618562 FOSBP53539 338 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 TYRO3Q06418 890 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 EYA3Q99504 573 aa29.46■■■□□ 2.31
VEGFC-202ENST00000618562 GAKO14976 1311 aa29.45■■■□□ 2.31
VEGFC-202ENST00000618562 BICD2Q8TD16 824 aa29.45■■■□□ 2.31
VEGFC-202ENST00000618562 UBAC1Q9BSL1 405 aa29.45■■■□□ 2.31
VEGFC-202ENST00000618562 C10orf71Q711Q0 1435 aa29.45■■■□□ 2.3
VEGFC-202ENST00000618562 ERICH2A1L162 156 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 SEC23AQ15436 765 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 C7orf43Q8WVR3 580 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 FAM217BQ9NTX9 383 aaPredicted RBP29.44■■■□□ 2.3
VEGFC-202ENST00000618562 ORC4O43929 436 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 CAMK4Q16566 473 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 CERS3Q8IU89 383 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 CCDC144CPQ8IYA2 1237 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 CERS5Q8N5B7 392 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 TGFBRAP1Q8WUH2 860 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 ZNF219Q9P2Y4 722 aaPredicted RBP29.44■■■□□ 2.3
VEGFC-202ENST00000618562 ORC3Q9UBD5 711 aaPredicted RBP29.44■■■□□ 2.3
VEGFC-202ENST00000618562 MRVI1Q9Y6F6 885 aa29.44■■■□□ 2.3
VEGFC-202ENST00000618562 NID2Q14112 1375 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 TNKSO95271 1327 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 RANBP6O60518 1105 aaKnown RBP29.43■■■□□ 2.3
VEGFC-202ENST00000618562 KIAA2012Q0VF49 1180 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 FBXW7Q969H0 707 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 DLEC1Q9Y238 1755 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 GOLGA8AA7E2F4 631 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 C12orf60Q5U649 245 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 SLF2Q8IX21 1173 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 TMTC2Q8N394 836 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 RCOR1Q9UKL0 485 aa29.43■■■□□ 2.3
VEGFC-202ENST00000618562 ZNF396Q96N95 335 aaPredicted RBP29.42■■■□□ 2.3
VEGFC-202ENST00000618562 SUGT1Q9Y2Z0 365 aa29.42■■■□□ 2.3
VEGFC-202ENST00000618562 SNED1Q8TER0 1413 aa29.42■■■□□ 2.3
VEGFC-202ENST00000618562 NR1I2O75469 434 aa29.41■■■□□ 2.3
VEGFC-202ENST00000618562 SLC3A2P08195 630 aaKnown RBP29.41■■■□□ 2.3
VEGFC-202ENST00000618562 SLC4A8Q2Y0W8 1093 aa29.41■■■□□ 2.3
VEGFC-202ENST00000618562 ZSCAN10Q96SZ4 725 aaPredicted RBP29.41■■■□□ 2.3
VEGFC-202ENST00000618562 DDX60LQ5H9U9 1706 aaKnown RBP29.41■■■□□ 2.3
VEGFC-202ENST00000618562 RHBDL3P58872 404 aa29.41■■■□□ 2.3
VEGFC-202ENST00000618562 NTRK3Q16288 839 aa29.41■■■□□ 2.3
VEGFC-202ENST00000618562 ENAHQ8N8S7 591 aaPredicted RBP29.41■■■□□ 2.3
VEGFC-202ENST00000618562 MXD3Q9BW11 206 aa29.41■■■□□ 2.3
VEGFC-202ENST00000618562 ECM29Q5VYK3 1845 aa29.41■■■□□ 2.3
VEGFC-202ENST00000618562 SYNE3Q6ZMZ3 975 aa29.4■■■□□ 2.3
VEGFC-202ENST00000618562 DBNDD1Q9H9R9 158 aa29.4■■■□□ 2.3
VEGFC-202ENST00000618562 DAGLAQ9Y4D2 1042 aa29.4■■■□□ 2.3
VEGFC-202ENST00000618562 G3V3G9 751 aa29.4■■■□□ 2.3
VEGFC-202ENST00000618562 DCAF8Q5TAQ9 597 aa29.4■■■□□ 2.3
VEGFC-202ENST00000618562 MAPKAPK5Q8IW41 473 aa29.4■■■□□ 2.3
VEGFC-202ENST00000618562 FOCADQ5VW36 1801 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms