RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 KLHL10Q6JEL2 608 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 FOXD4L3Q6VB84 417 aaPredicted RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 KRBA2Q6ZNG9 492 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 C20orf204Q6ZNR8 217 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 DHX32Q7L7V1 743 aaKnown RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 TRIM74Q86UV6 250 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 TRIM73Q86UV7 250 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 ERC1Q8IUD2 1116 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 CMTR1Q8N1G2 835 aaKnown RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 ACRBPQ8NEB7 543 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 DNAAF4Q8WXU2 420 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 EXOC4Q96A65 974 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 ZNF396Q96N95 335 aaPredicted RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 AGAP3Q96P47 875 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 MAF1Q9H063 256 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 SPATS2LQ9NUQ6 558 aaKnown RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 GNL3LQ9NVN8 582 aaKnown RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 IRAK4Q9NWZ3 460 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 CPSF2Q9P2I0 782 aaKnown RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 LRRFIP2Q9Y608 721 aaKnown RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 PTPRCP08575 1304 aa4.1□□□□□ -1.75
SMC5-204ENST00000618375 SOS1Q07889 1333 aaPredicted RBP4.1□□□□□ -1.75
SMC5-204ENST00000618375 CDKL5O76039 1030 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 MBD3O95983 291 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 SSFA2P28290 1259 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 ELF1P32519 619 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 AFF1P51825 1210 aaKnown RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 MRPL12P52815 198 aaKnown RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 COL9A3Q14050 684 aaPredicted RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 RASA3Q14644 834 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 SF3A1Q15459 793 aaKnown RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 GJC2Q5T442 439 aaPredicted RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 ZNF280DQ6N043 979 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 SHISA2Q6UWI4 295 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 HFE2Q6ZVN8 426 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 WFDC8Q8IUA0 241 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 RGL4Q8IZJ4 473 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 CACTIN-AS1Q8N1I8 211 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 GIMAP7Q8NHV1 300 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 CXorf38Q8TB03 319 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 KIAA1524Q8TCG1 905 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 C17orf50Q8WW18 174 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 IFT43Q96FT9 208 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 ERO1AQ96HE7 468 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 RMDN2Q96LZ7 410 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 UBXN6Q9BZV1 441 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 TRIM6Q9C030 488 aaPredicted RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 IQCGQ9H095 443 aaKnown RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 UTP6Q9NYH9 597 aaKnown RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 NAGPAQ9UK23 515 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 NOVA2Q9UNW9 492 aaKnown RBP4.09□□□□□ -1.75
SMC5-204ENST00000618375 BCS1LQ9Y276 419 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 ROCK1Q13464 1354 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 ANKRD30AQ9BXX3 1397 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 SPATA31E1Q6ZUB1 1445 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 CECR2Q9BXF3 1484 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 TIAM1Q13009 1591 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 SAMD9Q5K651 1589 aa4.09□□□□□ -1.75
SMC5-204ENST00000618375 HMGB1P1B2RPK0 211 aaPredicted RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 PDLIM1O00151 329 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 ATP10AO60312 1499 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 PRMT3O60678 531 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 XYLBO75191 536 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 ELP1O95163 1332 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 GHRHP01286 108 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 FAM200BP0CF97 657 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 MYBL2P10244 700 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 H2AFXP16104 143 aaPredicted RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 WEE1P30291 646 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 ALDH1B1P30837 517 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 INPP5BP32019 993 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 ACTN2P35609 894 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 EIF5P55010 431 aaKnown RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 PRDM15P57071 1507 aaPredicted RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 RBM6P78332 1123 aaKnown RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 MBTPS1Q14703 1052 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 RSPO4Q2I0M5 234 aaPredicted RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 HSP90AB2PQ58FF8 381 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 C20orf194Q5TEA3 1177 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 MSL1Q68DK7 614 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 NAIF1Q69YI7 327 aaPredicted RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 TADA2BQ86TJ2 420 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 TXNRD3Q86VQ6 643 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 TREML1Q86YW5 311 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 RPUSD2Q8IZ73 545 aaKnown RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 RNF214Q8ND24 703 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 ZNF483Q8TF39 744 aaPredicted RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 TCP11Q8WWU5 503 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 PIK3R5Q8WYR1 880 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 JARID2Q92833 1246 aaPredicted RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 TP53INP1Q96A56 240 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 ZNF428Q96B54 188 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 KIF2CQ99661 725 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 ARPC5LQ9BPX5 153 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 CRACR2AQ9BSW2 395 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 SMG9Q9H0W8 520 aaKnown RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 QTRT2Q9H974 415 aaKnown RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 HOMER3Q9NSC5 361 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 USP25Q9UHP3 1055 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms