RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 CDK5RAP2Q96SN8 1893 aa18.8■□□□□ 0.6
MALAT1-213ENST00000618227 ZNF213O14771 459 aa18.8■□□□□ 0.6
MALAT1-213ENST00000618227 FGRP09769 529 aa18.8■□□□□ 0.6
MALAT1-213ENST00000618227 PLCD1P51178 756 aa18.8■□□□□ 0.6
MALAT1-213ENST00000618227 PPARAQ07869 468 aa18.8■□□□□ 0.6
MALAT1-213ENST00000618227 NECTIN1Q15223 517 aa18.8■□□□□ 0.6
MALAT1-213ENST00000618227 MAP3K11Q16584 847 aa18.8■□□□□ 0.6
MALAT1-213ENST00000618227 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
MALAT1-213ENST00000618227 PPP1R12BO60237 982 aaPredicted RBP18.79■□□□□ 0.6
MALAT1-213ENST00000618227 TSGA10IPQ3SY00 556 aa18.79■□□□□ 0.6
MALAT1-213ENST00000618227 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
MALAT1-213ENST00000618227 C16orf86Q6ZW13 317 aa18.79■□□□□ 0.6
MALAT1-213ENST00000618227 USP26Q9BXU7 913 aa18.79■□□□□ 0.6
MALAT1-213ENST00000618227 GINM1Q9NU53 330 aa18.79■□□□□ 0.6
MALAT1-213ENST00000618227 ZNF112Q9UJU3 913 aa18.79■□□□□ 0.6
MALAT1-213ENST00000618227 SCAF8Q9UPN6 1271 aaKnown RBP18.79■□□□□ 0.6
MALAT1-213ENST00000618227 MINDY4BA8MYZ0 360 aa18.78■□□□□ 0.6
MALAT1-213ENST00000618227 TATDN1Q6P1N9 297 aa18.78■□□□□ 0.6
MALAT1-213ENST00000618227 CRACR2BQ8N4Y2 399 aaPredicted RBP18.78■□□□□ 0.6
MALAT1-213ENST00000618227 KCNB2Q92953 911 aa18.78■□□□□ 0.6
MALAT1-213ENST00000618227 TRIM34Q9BYJ4 488 aa18.78■□□□□ 0.6
MALAT1-213ENST00000618227 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
MALAT1-213ENST00000618227 RNF41Q9H4P4 317 aaPredicted RBP18.78■□□□□ 0.6
MALAT1-213ENST00000618227 POLR2AP24928 1970 aaKnown RBP18.78■□□□□ 0.6
MALAT1-213ENST00000618227 TRAF5O00463 557 aa18.77■□□□□ 0.6
MALAT1-213ENST00000618227 CYP2D6P10635 497 aa18.77■□□□□ 0.6
MALAT1-213ENST00000618227 PDE4BQ07343 736 aa18.77■□□□□ 0.6
MALAT1-213ENST00000618227 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.6
MALAT1-213ENST00000618227 STAG1Q8WVM7 1258 aa18.77■□□□□ 0.6
MALAT1-213ENST00000618227 CCDC17Q96LX7 622 aa18.77■□□□□ 0.6
MALAT1-213ENST00000618227 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.77■□□□□ 0.6
MALAT1-213ENST00000618227 NAV1Q8NEY1 1877 aa18.77■□□□□ 0.6
MALAT1-213ENST00000618227 MYH1P12882 1939 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 ORC4O43929 436 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 USP2O75604 605 aaPredicted RBP18.76■□□□□ 0.59
MALAT1-213ENST00000618227 HSPA4P34932 840 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 CDK8P49336 464 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 AKNAD1Q5T1N1 836 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 PRAMEF18Q5VWM3 479 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 ARMC9Q7Z3E5 817 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 BACH2Q9BYV9 841 aa18.76■□□□□ 0.59
MALAT1-213ENST00000618227 CYP2D7A0A087X1C5 515 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 PHF20L1A8MW92 1017 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 CYP21A2P08686 494 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 MCCP23508 829 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
MALAT1-213ENST00000618227 CREB3L3Q68CJ9 461 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 KLRG1Q96E93 195 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 DNAJC18Q9H819 358 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 CNNM2Q9H8M5 875 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.75■□□□□ 0.59
MALAT1-213ENST00000618227 SSC5DA1L4H1 1573 aa18.75■□□□□ 0.59
MALAT1-213ENST00000618227 SLC27A2O14975 620 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 CTNND1O60716 968 aaKnown RBP18.74■□□□□ 0.59
MALAT1-213ENST00000618227 CELF2O95319 508 aaKnown RBP18.74■□□□□ 0.59
MALAT1-213ENST00000618227 ZKSCAN1P17029 563 aaPredicted RBP18.74■□□□□ 0.59
MALAT1-213ENST00000618227 SHMT1P34896 483 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 KRT32Q14532 448 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 LDLRAD1Q5T700 205 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 CST9Q5W186 159 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 DLK2Q6UY11 383 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 MFSD6Q6ZSS7 791 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 MIGA2Q7L4E1 593 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 C2orf69Q8N8R5 385 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 IL17RAQ96F46 866 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 NBPF3Q9H094 633 aa18.74■□□□□ 0.59
MALAT1-213ENST00000618227 GBA2Q9HCG7 927 aaPredicted RBP18.74■□□□□ 0.59
MALAT1-213ENST00000618227 SEC24BO95487 1268 aa18.73■□□□□ 0.59
MALAT1-213ENST00000618227 ANAPC15P60006 121 aa18.73■□□□□ 0.59
MALAT1-213ENST00000618227 MAP3K9P80192 1104 aa18.73■□□□□ 0.59
MALAT1-213ENST00000618227 NOL9Q5SY16 702 aaKnown RBP18.73■□□□□ 0.59
MALAT1-213ENST00000618227 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.73■□□□□ 0.59
MALAT1-213ENST00000618227 DYNLL2Q96FJ2 89 aa18.73■□□□□ 0.59
MALAT1-213ENST00000618227 MKNK2Q9HBH9 465 aa18.73■□□□□ 0.59
MALAT1-213ENST00000618227 BAZ2AQ9UIF9 1905 aaKnown RBP18.72■□□□□ 0.59
MALAT1-213ENST00000618227 HAND2P61296 217 aa18.72■□□□□ 0.59
MALAT1-213ENST00000618227 CTDSPL2Q05D32 466 aa18.72■□□□□ 0.59
MALAT1-213ENST00000618227 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
MALAT1-213ENST00000618227 ANKRD13AQ8IZ07 590 aa18.72■□□□□ 0.59
MALAT1-213ENST00000618227 ZNF444Q8N0Y2 327 aaPredicted RBP18.72■□□□□ 0.59
MALAT1-213ENST00000618227 KRT23Q9C075 422 aa18.72■□□□□ 0.59
MALAT1-213ENST00000618227 UPF2Q9HAU5 1272 aaKnown RBP18.72■□□□□ 0.59
MALAT1-213ENST00000618227 RASA1P20936 1047 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 CAP2P40123 477 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 EVX2Q03828 476 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 TRDNQ13061 729 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 SLC4A8Q2Y0W8 1093 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 TBC1D10CQ8IV04 446 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 HHIPL1Q96JK4 782 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 TBC1D2Q9BYX2 928 aa18.71■□□□□ 0.59
MALAT1-213ENST00000618227 ANGEL1Q9UNK9 670 aaKnown RBP18.71■□□□□ 0.59
MALAT1-213ENST00000618227 PAPPA2Q9BXP8 1791 aa18.7■□□□□ 0.58
MALAT1-213ENST00000618227 SIPA1L1O43166 1804 aa18.7■□□□□ 0.58
MALAT1-213ENST00000618227 TMEM88BA6NKF7 163 aa18.7■□□□□ 0.58
MALAT1-213ENST00000618227 E7EWF7 191 aa18.7■□□□□ 0.58
MALAT1-213ENST00000618227 SMIM22K7EJ46 135 aa18.7■□□□□ 0.58
MALAT1-213ENST00000618227 ASNSP08243 561 aa18.7■□□□□ 0.58
MALAT1-213ENST00000618227 FMR1Q06787 632 aaKnown RBP eCLIP18.7■□□□□ 0.58
MALAT1-213ENST00000618227 PPP4R3BQ5MIZ7 849 aa18.7■□□□□ 0.58
MALAT1-213ENST00000618227 ESR2Q92731 530 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms