RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 DNAJC18Q9H819 358 aa27.03■■□□□ 1.92
CBWD3-213ENST00000618217 SERPINB13Q9UIV8 391 aa27.03■■□□□ 1.92
CBWD3-213ENST00000618217 MINDY4BA8MYZ0 360 aa27.02■■□□□ 1.92
CBWD3-213ENST00000618217 HERC5Q9UII4 1024 aaKnown RBP27.02■■□□□ 1.92
CBWD3-213ENST00000618217 ANAPC4Q9UJX5 808 aa27.02■■□□□ 1.92
CBWD3-213ENST00000618217 PPARAQ07869 468 aa27.01■■□□□ 1.92
CBWD3-213ENST00000618217 AMOTL1Q8IY63 956 aa27.01■■□□□ 1.92
CBWD3-213ENST00000618217 NBPF3Q9H094 633 aa27.01■■□□□ 1.92
CBWD3-213ENST00000618217 CTNNA3Q9UI47 895 aa27.01■■□□□ 1.92
CBWD3-213ENST00000618217 U3KPZ7 1027 aaPredicted RBP27.01■■□□□ 1.92
CBWD3-213ENST00000618217 ROBO3Q96MS0 1386 aa27.01■■□□□ 1.92
CBWD3-213ENST00000618217 FAM196BA6NMK8 535 aa27.01■■□□□ 1.91
CBWD3-213ENST00000618217 REC8O95072 547 aa27.01■■□□□ 1.91
CBWD3-213ENST00000618217 NF2P35240 595 aa27.01■■□□□ 1.91
CBWD3-213ENST00000618217 DYNLL2Q96FJ2 89 aa27.01■■□□□ 1.91
CBWD3-213ENST00000618217 TAOK2Q9UL54 1235 aa27.01■■□□□ 1.91
CBWD3-213ENST00000618217 FZD1Q9UP38 647 aa27.01■■□□□ 1.91
CBWD3-213ENST00000618217 RBM8AQ9Y5S9 174 aaKnown RBP27.01■■□□□ 1.91
CBWD3-213ENST00000618217 USP2O75604 605 aaPredicted RBP27■■□□□ 1.91
CBWD3-213ENST00000618217 CELF2O95319 508 aaKnown RBP27■■□□□ 1.91
CBWD3-213ENST00000618217 SEC24BO95487 1268 aa27■■□□□ 1.91
CBWD3-213ENST00000618217 DCAF15Q66K64 600 aa27■■□□□ 1.91
CBWD3-213ENST00000618217 PAPPA2Q9BXP8 1791 aa27■■□□□ 1.91
CBWD3-213ENST00000618217 PHF20L1A8MW92 1017 aa26.99■■□□□ 1.91
CBWD3-213ENST00000618217 NECTIN1Q15223 517 aa26.99■■□□□ 1.91
CBWD3-213ENST00000618217 ZNF408Q9H9D4 720 aa26.99■■□□□ 1.91
CBWD3-213ENST00000618217 ZNF112Q9UJU3 913 aa26.99■■□□□ 1.91
CBWD3-213ENST00000618217 MAP3K11Q16584 847 aa26.98■■□□□ 1.91
CBWD3-213ENST00000618217 C16orf86Q6ZW13 317 aa26.98■■□□□ 1.91
CBWD3-213ENST00000618217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.98■■□□□ 1.91
CBWD3-213ENST00000618217 TACC3Q9Y6A5 838 aa26.98■■□□□ 1.91
CBWD3-213ENST00000618217 EPB41L2O43491 1005 aaKnown RBP26.98■■□□□ 1.91
CBWD3-213ENST00000618217 PPP1R12BO60237 982 aaPredicted RBP26.98■■□□□ 1.91
CBWD3-213ENST00000618217 SHMT1P34896 483 aa26.98■■□□□ 1.91
CBWD3-213ENST00000618217 HAND2P61296 217 aa26.98■■□□□ 1.91
CBWD3-213ENST00000618217 CRACR2BQ8N4Y2 399 aaPredicted RBP26.98■■□□□ 1.91
CBWD3-213ENST00000618217 SLC44A5Q8NCS7 719 aa26.98■■□□□ 1.91
CBWD3-213ENST00000618217 KLRG1Q96E93 195 aa26.98■■□□□ 1.91
CBWD3-213ENST00000618217 CYP21A2P08686 494 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 CTDSPL2Q05D32 466 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 PRKG1Q13976 671 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 TATDN1Q6P1N9 297 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 MOB2Q70IA6 237 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 USP26Q9BXU7 913 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 ZNF341Q9BYN7 854 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 GBA2Q9HCG7 927 aaPredicted RBP26.97■■□□□ 1.91
CBWD3-213ENST00000618217 MYH8P13535 1937 aa26.97■■□□□ 1.91
CBWD3-213ENST00000618217 ZNF213O14771 459 aa26.96■■□□□ 1.91
CBWD3-213ENST00000618217 FGRP09769 529 aa26.96■■□□□ 1.91
CBWD3-213ENST00000618217 CDK8P49336 464 aa26.96■■□□□ 1.91
CBWD3-213ENST00000618217 RRP1BQ14684 758 aaKnown RBP26.96■■□□□ 1.91
CBWD3-213ENST00000618217 OTOFQ9HC10 1997 aa26.96■■□□□ 1.91
CBWD3-213ENST00000618217 FKBP1BP68106 108 aa26.95■■□□□ 1.91
CBWD3-213ENST00000618217 IMMTQ16891 758 aaKnown RBP26.95■■□□□ 1.91
CBWD3-213ENST00000618217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.95■■□□□ 1.91
CBWD3-213ENST00000618217 SWAP70Q9UH65 585 aa26.95■■□□□ 1.91
CBWD3-213ENST00000618217 TAF6LQ9Y6J9 622 aa26.95■■□□□ 1.91
CBWD3-213ENST00000618217 TBC1D10CQ8IV04 446 aa26.94■■□□□ 1.9
CBWD3-213ENST00000618217 INCENPQ9NQS7 918 aa26.94■■□□□ 1.9
CBWD3-213ENST00000618217 ANGEL1Q9UNK9 670 aaKnown RBP26.94■■□□□ 1.9
CBWD3-213ENST00000618217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.94■■□□□ 1.9
CBWD3-213ENST00000618217 LDLRAD1Q5T700 205 aa26.94■■□□□ 1.9
CBWD3-213ENST00000618217 STK11IPQ8N1F8 1099 aa26.94■■□□□ 1.9
CBWD3-213ENST00000618217 C2orf69Q8N8R5 385 aa26.94■■□□□ 1.9
CBWD3-213ENST00000618217 SLC27A2O14975 620 aa26.93■■□□□ 1.9
CBWD3-213ENST00000618217 CREB3L3Q68CJ9 461 aa26.93■■□□□ 1.9
CBWD3-213ENST00000618217 ARMC9Q7Z3E5 817 aa26.93■■□□□ 1.9
CBWD3-213ENST00000618217 TRIM34Q9BYJ4 488 aa26.93■■□□□ 1.9
CBWD3-213ENST00000618217 UBE2Q2LH0YL09 131 aa26.92■■□□□ 1.9
CBWD3-213ENST00000618217 EIF5BO60841 1220 aaKnown RBP26.92■■□□□ 1.9
CBWD3-213ENST00000618217 SLC3A2P08195 630 aaKnown RBP26.92■■□□□ 1.9
CBWD3-213ENST00000618217 INPP5BP32019 993 aa26.92■■□□□ 1.9
CBWD3-213ENST00000618217 IREB2P48200 963 aaKnown RBP26.92■■□□□ 1.9
CBWD3-213ENST00000618217 AKNAD1Q5T1N1 836 aa26.92■■□□□ 1.9
CBWD3-213ENST00000618217 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.92■■□□□ 1.9
CBWD3-213ENST00000618217 STAG1Q8WVM7 1258 aa26.92■■□□□ 1.9
CBWD3-213ENST00000618217 KCNB2Q92953 911 aa26.92■■□□□ 1.9
CBWD3-213ENST00000618217 WRNIP1Q96S55 665 aa26.92■■□□□ 1.9
CBWD3-213ENST00000618217 HSPA4P34932 840 aa26.91■■□□□ 1.9
CBWD3-213ENST00000618217 JAG1P78504 1218 aa26.91■■□□□ 1.9
CBWD3-213ENST00000618217 PDE4BQ07343 736 aa26.91■■□□□ 1.9
CBWD3-213ENST00000618217 TTLL12Q14166 644 aaPredicted RBP26.91■■□□□ 1.9
CBWD3-213ENST00000618217 ATAD5Q96QE3 1844 aa26.91■■□□□ 1.9
CBWD3-213ENST00000618217 TMEM88BA6NKF7 163 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 ORC4O43929 436 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 RASA1P20936 1047 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 CAP2P40123 477 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 MAP3K9P80192 1104 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 ZKSCAN4Q969J2 545 aaPredicted RBP26.9■■□□□ 1.9
CBWD3-213ENST00000618217 BACH2Q9BYV9 841 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 CTNND1O60716 968 aaKnown RBP26.9■■□□□ 1.9
CBWD3-213ENST00000618217 PRDM1O75626 825 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 PCP11498 1178 aaKnown RBP26.9■■□□□ 1.9
CBWD3-213ENST00000618217 APLP1P51693 650 aa26.9■■□□□ 1.9
CBWD3-213ENST00000618217 CERKLQ49MI3 558 aaPredicted RBP26.9■■□□□ 1.9
CBWD3-213ENST00000618217 DOCK1Q14185 1865 aa26.89■■□□□ 1.9
CBWD3-213ENST00000618217 UNCXA6NJT0 531 aa26.89■■□□□ 1.9
CBWD3-213ENST00000618217 SHROOM1Q2M3G4 852 aaPredicted RBP26.89■■□□□ 1.9
CBWD3-213ENST00000618217 TSGA10IPQ3SY00 556 aa26.89■■□□□ 1.9
CBWD3-213ENST00000618217 RASEFQ8IZ41 740 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms