RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 IFNKQ9P0W0 207 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 PPFIBP2Q8ND30 876 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 I3L4J1 428 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 YWHAEP62258 255 aaKnown RBP12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 TUBB2AQ13885 445 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 CACNA2D3Q8IZS8 1091 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 NCAPGQ9BPX3 1015 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 TUBB2BQ9BVA1 445 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 ZBED4O75132 1171 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 GBP1P32455 592 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 GTF2A1P52655 376 aaPredicted RBP12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 GINS2Q9Y248 185 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 CETN3O15182 167 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 NR1I2O75469 434 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 CCDC186Q7Z3E2 898 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 PLIN2Q99541 437 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 A6NNZ2 444 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 RSRC1Q96IZ7 334 aaKnown RBP12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 SYNRGQ9UMZ2 1314 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 NUP160Q12769 1436 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 CROCCP2Q86T23 111 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 SYCE1Q8N0S2 351 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 CALCRLQ16602 461 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 TEKT1Q969V4 418 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 JAG2Q9Y219 1238 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 PRPF6O94906 941 aaKnown RBP12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 CASC4Q6P4E1 433 aa12.43□□□□□ -0.42
CCDC144B-208ENST00000618081 NEDD9Q14511 834 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 FCHSD1Q86WN1 690 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 IFT20Q8IY31 132 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 MICALL1Q8N3F8 863 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 SNX21Q969T3 373 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 PLXNC1O60486 1568 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 RHOXF2BP0C7M4 288 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 KARSQ15046 597 aaKnown RBP12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 SH2D4BQ5SQS7 431 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 RHOXF2Q9BQY4 288 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 MRPL44Q9H9J2 332 aaKnown RBP12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 DNM3Q9UQ16 869 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 PDE4DQ08499 809 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 MBD4O95243 580 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 OTUD6AQ7L8S5 288 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 PLCB1Q9NQ66 1216 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 ZNF277Q9NRM2 450 aaPredicted RBP12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 MYL5Q02045 173 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 GCNT3O95395 438 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 HIBADHP31937 336 aaKnown RBP12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 SLC1A4P43007 532 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 AK2P54819 239 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 ARHGAP24Q8N264 748 aa12.42□□□□□ -0.42
CCDC144B-208ENST00000618081 TBC1D8BQ0IIM8 1120 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 DNAJC21Q5F1R6 531 aaKnown RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 ZNF174Q15697 407 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 SLC12A2P55011 1212 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 SEPT14Q6ZU15 432 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 USH1CQ9Y6N9 552 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 SLC9C1Q4G0N8 1177 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 CASQ2O14958 399 aaPredicted RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 ANGEL1Q9UNK9 670 aaKnown RBP12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 RXRAP19793 462 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
CCDC144B-208ENST00000618081 IRX3P78415 501 aaPredicted RBP12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 DPP8Q6V1X1 898 aaPredicted RBP12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 TTLL3Q9Y4R7 772 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 ALDH1B1P30837 517 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 FEZ2Q9UHY8 353 aaPredicted RBP12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 TTC31Q49AM3 519 aaPredicted RBP12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 MAST1Q9Y2H9 1570 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 FLOT1O75955 427 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 EIF4A2Q14240 407 aaKnown RBP12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 PPP2R5BQ15173 497 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 CEP120Q8N960 986 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 PPP2R5DQ14738 602 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 LARGE2Q8N3Y3 721 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 MYCT1Q8N699 235 aa12.4□□□□□ -0.42
CCDC144B-208ENST00000618081 POLR2DO15514 142 aaKnown RBP12.4□□□□□ -0.43
CCDC144B-208ENST00000618081 ITGA6P23229 1130 aa12.4□□□□□ -0.43
CCDC144B-208ENST00000618081 IGSF22Q8N9C0 903 aa12.4□□□□□ -0.43
CCDC144B-208ENST00000618081 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.43
CCDC144B-208ENST00000618081 IGHDP01880 384 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms