RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 APPBP2Q92624 585 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 DESI2Q9BSY9 194 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 IFIH1Q9BYX4 1025 aaKnown RBP11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 CETN3O15182 167 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 GCKP35557 465 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 CLUL1Q15846 466 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 TRIM58Q8NG06 486 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 TDRD7Q8NHU6 1098 aaKnown RBP11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 BABAM1Q9NWV8 329 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 SLC8A1P32418 973 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 TIMM10P62072 90 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 FCHSD1Q86WN1 690 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 RNF10Q8N5U6 811 aaKnown RBP11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 RAB3IL1Q8TBN0 382 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 KDM5BQ9UGL1 1544 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 EXOC5O00471 708 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 MBD4O95243 580 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 ZNF131P52739 623 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 GKAP1Q5VSY0 366 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 A0A1W2PP64 1363 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 HGSO14964 777 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 PFKFB1P16118 471 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 PIK3AP1Q6ZUJ8 805 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 USP28Q96RU2 1077 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 NUCKS1Q9H1E3 243 aaKnown RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 PDE11AQ9HCR9 933 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 RRP15Q9Y3B9 282 aaKnown RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 UHRF1BP1Q6BDS2 1440 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 PNOCQ13519 176 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 CCDC62Q6P9F0 684 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 EYA1Q99502 592 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 FRMD4BQ9Y2L6 1034 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 EYA2O00167 538 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 RNF40O75150 1001 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 CDC25BP30305 580 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 RASSF2P50749 326 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 SYCE1Q8N0S2 351 aa11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 DDX23Q9BUQ8 820 aaKnown RBP11.87□□□□□ -0.51
CLTCL1-209ENST00000617103 NPATQ14207 1427 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 STX10O60499 249 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 HOXB7P09629 217 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 KLHL30Q0D2K2 578 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 FLOT1O75955 427 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 NBPF6Q5VWK0 638 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 PHLDB2Q86SQ0 1253 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 VPS52Q8N1B4 723 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 NBPF4Q96M43 638 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 RGS12O14924 1447 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 HIP1RO75146 1068 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 CTNNA1P35221 906 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 HHATQ5VTY9 493 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 ASIC3Q9UHC3 531 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 PEX26Q7Z412 305 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 RAB17Q9H0T7 212 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 CDC23Q9UJX2 597 aa11.86□□□□□ -0.51
CLTCL1-209ENST00000617103 TCP1P17987 556 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 CMA1P23946 247 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 TPD52P55327 224 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 HYOU1Q9Y4L1 999 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 TCOF1Q13428 1488 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 GPAA1O43292 621 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 APBA1Q02410 837 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 PPARDQ03181 441 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 TCHPQ9BT92 498 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 NRBP1Q9UHY1 535 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 ABCC4O15439 1325 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 RGS16O15492 202 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 TRIML1Q8N9V2 468 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 HELBQ8NG08 1087 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 KIFAP3Q92845 792 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 PHKBQ93100 1093 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 ZNF274Q96GC6 653 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 PPP1R13BQ96KQ4 1090 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 CCT5P48643 541 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 LONRF2Q1L5Z9 754 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms