RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 EPHB4P54760 987 aa13.33□□□□□ -0.28
AP003900.1-202ENST00000616952 DSG2Q14126 1118 aa13.33□□□□□ -0.28
AP003900.1-202ENST00000616952 FASTKD5Q7L8L6 764 aaKnown RBP13.33□□□□□ -0.28
AP003900.1-202ENST00000616952 PDLIM7Q9NR12 457 aa13.33□□□□□ -0.28
AP003900.1-202ENST00000616952 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.28
AP003900.1-202ENST00000616952 A0A0G2JLL6 359 aaPredicted RBP13.32□□□□□ -0.28
AP003900.1-202ENST00000616952 ERC2O15083 957 aa13.32□□□□□ -0.28
AP003900.1-202ENST00000616952 CCND3P30281 292 aaPredicted RBP13.32□□□□□ -0.28
AP003900.1-202ENST00000616952 CACNB3P54284 484 aa13.32□□□□□ -0.28
AP003900.1-202ENST00000616952 PRRT2Q7Z6L0 340 aaPredicted RBP13.32□□□□□ -0.28
AP003900.1-202ENST00000616952 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
AP003900.1-202ENST00000616952 KCNJ4P48050 445 aa13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 CTSWP56202 376 aa13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 CACNB2Q08289 660 aaPredicted RBP13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 CC2D1BQ5T0F9 858 aaKnown RBP13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 GADL1Q6ZQY3 521 aa13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 PHOX2BQ99453 314 aa13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 TTF2Q9UNY4 1162 aaKnown RBP13.31□□□□□ -0.28
AP003900.1-202ENST00000616952 FRMPD3Q5JV73 1810 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 TRIM43BA6NCK2 446 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 IL1R1P14778 569 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 NOL9Q5SY16 702 aaKnown RBP13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 MIGA2Q7L4E1 593 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 MICALL1Q8N3F8 863 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 TRIM43Q96BQ3 446 aaPredicted RBP13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 PBX4Q9BYU1 374 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 CHPF2Q9P2E5 772 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 DOCK3Q8IZD9 2030 aa13.3□□□□□ -0.28
AP003900.1-202ENST00000616952 DNM1LO00429 736 aa13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 CYP2B6P20813 491 aa13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 CRKP46108 304 aa13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 SKIV2LQ15477 1246 aaKnown RBP13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 SH3RF1Q7Z6J0 888 aa13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 GREM2Q9H772 168 aa13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 ZNF112Q9UJU3 913 aa13.29□□□□□ -0.28
AP003900.1-202ENST00000616952 CACNA1GO43497 2377 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 TLL1O43897 1013 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 TBC1D12O60347 775 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 TRIM60Q495X7 471 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 ZNF804AQ7Z570 1209 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 FAM83AQ86UY5 434 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
AP003900.1-202ENST00000616952 PLXNB2O15031 1838 aa13.27□□□□□ -0.28
AP003900.1-202ENST00000616952 PKD1L2Q7Z442 2459 aa13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 XRCC5P13010 732 aaKnown RBP13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 MFSD14BQ5SR56 506 aa13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 SOCS4Q8WXH5 440 aa13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 CD320Q9NPF0 282 aa13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 CACNA1BQ00975 2339 aa13.27□□□□□ -0.29
AP003900.1-202ENST00000616952 ITGB8P26012 769 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 FPGSQ05932 587 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 SNX17Q15036 470 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 C15orf52Q6ZUT6 534 aaKnown RBP13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 HERVK_113Q902F9 699 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 CFAP53Q96M91 514 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 DAGLAQ9Y4D2 1042 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 SPTBN4Q9H254 2564 aa13.26□□□□□ -0.29
AP003900.1-202ENST00000616952 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 SNAP23O00161 211 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 KRT37O76014 449 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 SLC39A5Q6ZMH5 540 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 AGTPBP1Q9UPW5 1226 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 ZHX2Q9Y6X8 837 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 DCHS1Q96JQ0 3298 aa13.25□□□□□ -0.29
AP003900.1-202ENST00000616952 GRXCR1A8MXD5 290 aa13.24□□□□□ -0.29
AP003900.1-202ENST00000616952 GCLCP48506 637 aaPredicted RBP13.24□□□□□ -0.29
AP003900.1-202ENST00000616952 FKBP1CQ5VVH2 108 aa13.24□□□□□ -0.29
AP003900.1-202ENST00000616952 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
AP003900.1-202ENST00000616952 LPAR1Q92633 364 aa13.24□□□□□ -0.29
AP003900.1-202ENST00000616952 NUDT12Q9BQG2 462 aa13.24□□□□□ -0.29
AP003900.1-202ENST00000616952 COG5Q9UP83 839 aa13.24□□□□□ -0.29
AP003900.1-202ENST00000616952 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 CHRNDQ07001 517 aa13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 CCL14Q16627 93 aa13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 DDX20Q9UHI6 824 aaKnown RBP13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 AFG3L2Q9Y4W6 797 aa13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 TRANK1O15050 2925 aa13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 RLFQ13129 1914 aa13.23□□□□□ -0.29
AP003900.1-202ENST00000616952 EPG5Q9HCE0 2579 aa13.22□□□□□ -0.29
AP003900.1-202ENST00000616952 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
AP003900.1-202ENST00000616952 MSCO60682 206 aa13.22□□□□□ -0.29
AP003900.1-202ENST00000616952 TREML2Q5T2D2 321 aa13.22□□□□□ -0.29
AP003900.1-202ENST00000616952 MYD88Q99836 296 aa13.22□□□□□ -0.29
AP003900.1-202ENST00000616952 PICK1Q9NRD5 415 aa13.22□□□□□ -0.29
AP003900.1-202ENST00000616952 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms