RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TRIM7Q9C029 511 aa17.56■□□□□ 0.4
NOP56-220ENST00000616692 NPHP1O15259 732 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
NOP56-220ENST00000616692 ERCC6LQ2NKX8 1250 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 FILIP1Q7Z7B0 1213 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 KIAA1328Q86T90 577 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 TNS4Q8IZW8 715 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 B4GALNT2Q8NHY0 566 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 TCP11Q8WWU5 503 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 EVI5LQ96CN4 794 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 NPR1P16066 1061 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 SFMBT2Q5VUG0 894 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 KCTD17Q8N5Z5 321 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 CABS1Q96KC9 395 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 IQCB1Q15051 598 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 COL13A1Q5TAT6 717 aaPredicted RBP17.55■□□□□ 0.4
NOP56-220ENST00000616692 MRFAP1Q9Y605 127 aa17.55■□□□□ 0.4
NOP56-220ENST00000616692 LIG3P49916 1009 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 WLSQ5T9L3 541 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 BICDL1Q6ZP65 573 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 C7orf43Q8WVR3 580 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 TSGA10Q9BZW7 698 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 ELP1O95163 1332 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
NOP56-220ENST00000616692 PTGS1P23219 599 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 PEX19P40855 299 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 LDHDQ86WU2 507 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 IQCF2Q8IXL9 164 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 UNC45AQ9H3U1 944 aa17.54■□□□□ 0.4
NOP56-220ENST00000616692 SHTN1A0MZ66 631 aa17.53■□□□□ 0.4
NOP56-220ENST00000616692 HTRA3P83110 453 aa17.53■□□□□ 0.4
NOP56-220ENST00000616692 SFSWAPQ12872 951 aaKnown RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 CCDC171Q6TFL3 1326 aa17.53■□□□□ 0.4
NOP56-220ENST00000616692 HSPA1AP0DMV8 641 aaKnown RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 HSPA1BP0DMV9 641 aaKnown RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 CASTP20810 708 aaKnown RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 GJA8P48165 433 aa17.53■□□□□ 0.4
NOP56-220ENST00000616692 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 NOL8Q76FK4 1167 aaKnown RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 CDC37L1Q7L3B6 337 aa17.53■□□□□ 0.4
NOP56-220ENST00000616692 RTKN2Q8IZC4 609 aa17.53■□□□□ 0.4
NOP56-220ENST00000616692 SNRNP27Q8WVK2 155 aaKnown RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 MMADHCQ9H3L0 296 aaPredicted RBP17.53■□□□□ 0.4
NOP56-220ENST00000616692 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
NOP56-220ENST00000616692 SKAP2O75563 359 aaPredicted RBP17.52■□□□□ 0.4
NOP56-220ENST00000616692 PRPF4BQ13523 1007 aaKnown RBP17.52■□□□□ 0.4
NOP56-220ENST00000616692 ARHGAP29Q52LW3 1261 aa17.52■□□□□ 0.4
NOP56-220ENST00000616692 KIAA0825Q8IV33 1275 aa17.52■□□□□ 0.4
NOP56-220ENST00000616692 TEKT1Q969V4 418 aa17.52■□□□□ 0.4
NOP56-220ENST00000616692 SASH3O75995 380 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 SASH1O94885 1247 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 TBC1D8O95759 1140 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
NOP56-220ENST00000616692 FAM81AQ8TBF8 368 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 MAGEA10P43363 369 aaPredicted RBP17.51■□□□□ 0.39
NOP56-220ENST00000616692 SLC7A5Q01650 507 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
NOP56-220ENST00000616692 TPTE2Q6XPS3 522 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 SLX4Q8IY92 1834 aa17.51■□□□□ 0.39
NOP56-220ENST00000616692 A1BGP04217 495 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 FAM200BP0CF97 657 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 RCSD1Q6JBY9 416 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 TMX3Q96JJ7 454 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 CNTNAP1P78357 1384 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 ERC2O15083 957 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 VCAM1P19320 739 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 FILIP1LQ4L180 1135 aa17.5■□□□□ 0.39
NOP56-220ENST00000616692 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 RGL1Q9NZL6 768 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 ADAMTSL1Q8N6G6 1762 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 DEUP1Q05D60 604 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 CD248Q9HCU0 757 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 SPATA7Q9P0W8 599 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 MYO6Q9UM54 1294 aa17.49■□□□□ 0.39
NOP56-220ENST00000616692 FRMD3A2A2Y4 597 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 ENO4A6NNW6 628 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 SEC31AO94979 1220 aaKnown RBP17.48■□□□□ 0.39
NOP56-220ENST00000616692 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
NOP56-220ENST00000616692 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.395e-8■□□□□ 9.4
NOP56-220ENST00000616692 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 TMEM98Q9Y2Y6 226 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 CDR1P51861 262 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 SLC8A3P57103 927 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 PTPN14Q15678 1187 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 NYAP1Q6ZVC0 841 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 OR8K1Q8NGG5 319 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 SPDL1Q96EA4 605 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 STK31Q9BXU1 1019 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 PHACTR1Q9C0D0 580 aa17.48■□□□□ 0.39
NOP56-220ENST00000616692 ERVV-1B6SEH8 477 aa17.47■□□□□ 0.39
NOP56-220ENST00000616692 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
NOP56-220ENST00000616692 PNMA8AQ86V59 439 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms