RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 SGMS1Q86VZ5 419 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 ROBO1Q9Y6N7 1651 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 LIFRP42702 1097 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 PPARAQ07869 468 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 SARM1Q6SZW1 724 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 DIS3L2Q8IYB7 885 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 TRIM22Q8IYM9 498 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 AK7Q96M32 723 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 COL4A1P02462 1669 aa16.01■□□□□ 0.15
CACNA1C-231ENST00000616390 MAGEB6P1A0A0J9YX57 407 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 GRIN1Q05586 938 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
CACNA1C-231ENST00000616390 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 TMC6Q7Z403 805 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 PDILTQ8N807 584 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 CDC5LQ99459 802 aaKnown RBP16■□□□□ 0.15
CACNA1C-231ENST00000616390 FOXN1O15353 648 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 NLRP12P59046 1061 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 PTPAQ15257 358 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 SAFBQ15424 915 aaKnown RBP eCLIP16■□□□□ 0.15
CACNA1C-231ENST00000616390 LONRF3Q496Y0 759 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 FMNL1O95466 1100 aaPredicted RBP16■□□□□ 0.15
CACNA1C-231ENST00000616390 ATP1A3P13637 1013 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 EVX2Q03828 476 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 FAM182BQ5T319 152 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 JMYQ8N9B5 988 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 CELF1Q92879 486 aaKnown RBP16■□□□□ 0.15
CACNA1C-231ENST00000616390 MAP3K14Q99558 947 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 PRDM16Q9HAZ2 1276 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
CACNA1C-231ENST00000616390 BAZ2AQ9UIF9 1905 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 KLRK1P26718 216 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 CDC25BP30305 580 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 CNNM3Q8NE01 707 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 OXER1Q8TDS5 423 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 TFCP2L1Q9NZI6 479 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 GNAT2P19087 354 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 ZNF654Q8IZM8 581 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 STAG1Q8WVM7 1258 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 ZNF652Q9Y2D9 606 aa15.99■□□□□ 0.15
CACNA1C-231ENST00000616390 ECM29Q5VYK3 1845 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 U2AF2P26368 475 aaKnown RBP eCLIP15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 CAVIN4Q5BKX8 364 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 NBPF11Q86T75 865 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 LINC00116Q8NCU8 138 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 TNKSO95271 1327 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 IFNAR1P17181 557 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 FANCBQ8NB91 859 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 CABP5Q9NP86 173 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 GNL3LQ9NVN8 582 aaKnown RBP15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 KCNH3Q9ULD8 1083 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 PCDHB6Q9Y5E3 794 aa15.98■□□□□ 0.15
CACNA1C-231ENST00000616390 NPHP1O15259 732 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 MMP1P03956 469 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 PSEN1P49768 467 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 PPP6R2O75170 966 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 TOB1P50616 345 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 TBC1D9BQ66K14 1250 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 GRAMD1CQ8IYS0 662 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 CRACR2BQ8N4Y2 399 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 VPS54Q9P1Q0 977 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 MINPP1Q9UNW1 487 aa15.97■□□□□ 0.15
CACNA1C-231ENST00000616390 FAM205CA6NFA0 338 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 TPM4P67936 248 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 AKAP17AQ02040 695 aaKnown RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 NAA30Q147X3 362 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 WASF1Q92558 559 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 CDCA7Q9BWT1 371 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 RNF41Q9H4P4 317 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 PNPLA7Q6ZV29 1317 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 POLR2DO15514 142 aaKnown RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 SERPINC1P01008 464 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 PPP4R3BQ5MIZ7 849 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 RESP18Q5W5W9 173 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 METTL16Q86W50 562 aaKnown RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 CERS3Q8IU89 383 aa15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 KRI1Q8N9T8 703 aaKnown RBP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 AATFQ9NY61 560 aaKnown RBP eCLIP15.96■□□□□ 0.15
CACNA1C-231ENST00000616390 CCZ1BP86790 482 aa15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 CCZ1P86791 482 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 GOLGA8FQ08AF8 430 aa15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 GOLGA8DPQ0D2H9 430 aa15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 NCAPHQ15003 741 aa15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 CEP135Q66GS9 1140 aa15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 FOXP4Q8IVH2 680 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 ESR2Q92731 530 aa15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 PCDHA5Q9Y5H7 936 aa15.95■□□□□ 0.14
CACNA1C-231ENST00000616390 PHLPP1O60346 1717 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms