RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 TUBB4AP04350 444 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 KIF4BQ2VIQ3 1234 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 CRACR2BQ8N4Y2 399 aaPredicted RBP15.98■□□□□ 0.15
SSBP2-220ENST00000615665 VPS54Q9P1Q0 977 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 hCG_1642624A0A1W2PR95 340 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 SLU7O95391 586 aaKnown RBP15.98■□□□□ 0.15
SSBP2-220ENST00000615665 EXOSC10Q01780 885 aaKnown RBP15.98■□□□□ 0.15
SSBP2-220ENST00000615665 SPAG1Q07617 926 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 NRBP1Q9UHY1 535 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 MST1RQ04912 1400 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 POSTNQ15063 836 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 KIAA1328Q86T90 577 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 MB21D2Q8IYB1 491 aaPredicted RBP15.98■□□□□ 0.15
SSBP2-220ENST00000615665 STRBPQ96SI9 672 aaKnown RBP15.98■□□□□ 0.15
SSBP2-220ENST00000615665 TCEAL9Q9UHQ7 104 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 CPDO75976 1380 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 ABCC12Q96J65 1359 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 A0A087WWV3 80 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 RBM6P78332 1123 aaKnown RBP15.97■□□□□ 0.15
SSBP2-220ENST00000615665 MLKLQ8NB16 471 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 CALML4Q96GE6 196 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 CTDP1Q9Y5B0 961 aaPredicted RBP15.97■□□□□ 0.15
SSBP2-220ENST00000615665 USP17L12C9JPN9 530 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 USP17L21D6R901 530 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 PRKAB2O43741 272 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.97■□□□□ 0.15
SSBP2-220ENST00000615665 FMN2Q9NZ56 1722 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 LCORLQ8N3X6 602 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 CLIC6Q96NY7 704 aa15.97■□□□□ 0.15
SSBP2-220ENST00000615665 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
SSBP2-220ENST00000615665 NAPAP54920 295 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 AMPD3Q01432 767 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 SYT10Q6XYQ8 523 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.96■□□□□ 0.15
SSBP2-220ENST00000615665 V9GYY5 206 aaPredicted RBP15.96■□□□□ 0.15
SSBP2-220ENST00000615665 TTC38Q5R3I4 469 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 FKBP15Q5T1M5 1219 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 TBC1D10CQ8IV04 446 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.15
SSBP2-220ENST00000615665 KIAA1524Q8TCG1 905 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 AIFM3Q96NN9 605 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 ZSCAN10Q96SZ4 725 aaPredicted RBP15.96■□□□□ 0.15
SSBP2-220ENST00000615665 ZSWIM5Q9P217 1185 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 ERLIN1O75477 346 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 PIK3AP1Q6ZUJ8 805 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 TRIM47Q96LD4 638 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 RIPOR2Q9Y4F9 1068 aa15.96■□□□□ 0.15
SSBP2-220ENST00000615665 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.14
SSBP2-220ENST00000615665 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.14
SSBP2-220ENST00000615665 CNBD1Q8NA66 436 aa15.96■□□□□ 0.14
SSBP2-220ENST00000615665 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
SSBP2-220ENST00000615665 GJB4Q9NTQ9 266 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 DCCP43146 1447 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 PPP6R2O75170 966 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 PLCG2P16885 1265 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 LRRC8AQ8IWT6 810 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 NFE2L3Q9Y4A8 694 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 SNAP23O00161 211 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 FMNL1O95466 1100 aaPredicted RBP15.95■□□□□ 0.14
SSBP2-220ENST00000615665 CDC25BP30305 580 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 LIFRP42702 1097 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
SSBP2-220ENST00000615665 DPCR1Q3MIW9 517 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 WDR66Q8TBY9 1149 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 SERTAD1Q9UHV2 236 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.95■□□□□ 0.14
SSBP2-220ENST00000615665 WDR19Q8NEZ3 1342 aa15.95■□□□□ 0.14
SSBP2-220ENST00000615665 KRBA2Q6ZNG9 492 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 FAM47AQ5JRC9 791 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 DTHD1Q6ZMT9 781 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 CSF1RP07333 972 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.94■□□□□ 0.14
SSBP2-220ENST00000615665 IFNAR1P17181 557 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 FERMT2Q96AC1 680 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 C6orf50Q9HD87 102 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 EXOC1Q9NV70 894 aa15.94■□□□□ 0.14
SSBP2-220ENST00000615665 IDEP14735 1019 aa15.93■□□□□ 0.14
SSBP2-220ENST00000615665 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
SSBP2-220ENST00000615665 BAG1Q99933 345 aaPredicted RBP15.93■□□□□ 0.14
SSBP2-220ENST00000615665 LUC7LQ9NQ29 371 aaKnown RBP15.93■□□□□ 0.14
SSBP2-220ENST00000615665 PSMA7O14818 248 aa15.93■□□□□ 0.14
SSBP2-220ENST00000615665 CYB5R4Q7L1T6 521 aa15.93■□□□□ 0.14
SSBP2-220ENST00000615665 TSC1Q92574 1164 aa15.93■□□□□ 0.14
SSBP2-220ENST00000615665 GOLPH3LQ9H4A5 285 aa15.93■□□□□ 0.14
SSBP2-220ENST00000615665 ARPP21Q9UBL0 812 aaPredicted RBP15.93■□□□□ 0.14
SSBP2-220ENST00000615665 SAP30BPQ9UHR5 308 aaKnown RBP15.93■□□□□ 0.14
SSBP2-220ENST00000615665 CCDC94Q9BW85 323 aaPredicted RBP15.93■□□□□ 0.14
SSBP2-220ENST00000615665 NFAT5O94916 1531 aa15.93■□□□□ 0.14
SSBP2-220ENST00000615665 RGPD8O14715 1765 aaPredicted RBP15.93■□□□□ 0.14
SSBP2-220ENST00000615665 SETD1AO15047 1707 aaKnown RBP15.92■□□□□ 0.14
SSBP2-220ENST00000615665 CCDC175P0C221 793 aa15.92■□□□□ 0.14
SSBP2-220ENST00000615665 ERFEQ4G0M1 354 aa15.92■□□□□ 0.14
SSBP2-220ENST00000615665 CACTINQ8WUQ7 758 aaKnown RBP15.92■□□□□ 0.14
SSBP2-220ENST00000615665 IL17RAQ96F46 866 aa15.92■□□□□ 0.14
SSBP2-220ENST00000615665 TIGD1Q96MW7 591 aa15.92■□□□□ 0.14
SSBP2-220ENST00000615665 KIF13AQ9H1H9 1805 aa15.92■□□□□ 0.14
SSBP2-220ENST00000615665 F8W031 263 aaPredicted RBP15.92■□□□□ 0.14
SSBP2-220ENST00000615665 FGFR1OPO95684 399 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms