RNA–Protein interactions for RNA: ENST00000615596.1

GTF2I-216, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-216ENST00000615596 ERC2O15083 957 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
GTF2I-216ENST00000615596 CHGBP05060 677 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 USP5P45974 858 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 UBE3CQ15386 1083 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 MS4A4AQ96JQ5 239 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
GTF2I-216ENST00000615596 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 CDK5RAP2Q96SN8 1893 aa16.61■□□□□ 0.25
GTF2I-216ENST00000615596 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
GTF2I-216ENST00000615596 PPATQ06203 517 aa16.6■□□□□ 0.25
GTF2I-216ENST00000615596 B4GALNT3Q6L9W6 998 aa16.6■□□□□ 0.25
GTF2I-216ENST00000615596 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
GTF2I-216ENST00000615596 IFNL1Q8IU54 200 aa16.6■□□□□ 0.25
GTF2I-216ENST00000615596 LNPKQ9C0E8 428 aa16.6■□□□□ 0.25
GTF2I-216ENST00000615596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
GTF2I-216ENST00000615596 STAP2Q9UGK3 403 aa16.6■□□□□ 0.25
GTF2I-216ENST00000615596 FOCADQ5VW36 1801 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 IRF6O14896 467 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 CTNND1O60716 968 aaKnown RBP16.59■□□□□ 0.25
GTF2I-216ENST00000615596 GTF2A2P52657 109 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 NUCB1Q02818 461 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 PPIL2Q13356 520 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 CRNKL1Q9BZJ0 848 aaKnown RBP16.59■□□□□ 0.25
GTF2I-216ENST00000615596 ARMT1Q9H993 441 aa16.59■□□□□ 0.25
GTF2I-216ENST00000615596 HERC5Q9UII4 1024 aaKnown RBP16.59■□□□□ 0.25
GTF2I-216ENST00000615596 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
GTF2I-216ENST00000615596 MBD4O95243 580 aa16.58■□□□□ 0.24
GTF2I-216ENST00000615596 PDE1AP54750 535 aa16.58■□□□□ 0.24
GTF2I-216ENST00000615596 METTL16Q86W50 562 aaKnown RBP16.58■□□□□ 0.24
GTF2I-216ENST00000615596 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
GTF2I-216ENST00000615596 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.24
GTF2I-216ENST00000615596 BRI3BPQ8WY22 251 aa16.58■□□□□ 0.24
GTF2I-216ENST00000615596 PTPN18Q99952 460 aa16.58■□□□□ 0.24
GTF2I-216ENST00000615596 LAMB1P07942 1786 aa16.57■□□□□ 0.24
GTF2I-216ENST00000615596 ALDH1A1P00352 501 aa16.57■□□□□ 0.24
GTF2I-216ENST00000615596 HLA-DOAP06340 250 aa16.57■□□□□ 0.24
GTF2I-216ENST00000615596 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
GTF2I-216ENST00000615596 SLC4A8Q2Y0W8 1093 aa16.57■□□□□ 0.24
GTF2I-216ENST00000615596 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
GTF2I-216ENST00000615596 DNAJC18Q9H819 358 aa16.57■□□□□ 0.24
GTF2I-216ENST00000615596 PICK1Q9NRD5 415 aa16.57■□□□□ 0.24
GTF2I-216ENST00000615596 CCL15-CCL14A0A0B4J2E2 113 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 RNF113AO15541 343 aaKnown RBP16.56■□□□□ 0.24
GTF2I-216ENST00000615596 PRKAB2O43741 272 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 PTPRAP18433 802 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 SNAPC2Q13487 334 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 CCL15Q16663 113 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 CRACR2BQ8N4Y2 399 aaPredicted RBP16.56■□□□□ 0.24
GTF2I-216ENST00000615596 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 DCP1AQ9NPI6 582 aaPredicted RBP16.56■□□□□ 0.24
GTF2I-216ENST00000615596 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 SIPA1L1O43166 1804 aa16.56■□□□□ 0.24
GTF2I-216ENST00000615596 MYH7P12883 1935 aa16.55■□□□□ 0.24
GTF2I-216ENST00000615596 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
GTF2I-216ENST00000615596 CETPP11597 493 aa16.55■□□□□ 0.24
GTF2I-216ENST00000615596 CAP2P40123 477 aa16.55■□□□□ 0.24
GTF2I-216ENST00000615596 TTC6Q86TZ1 520 aa16.55■□□□□ 0.24
GTF2I-216ENST00000615596 R3HDMLQ9H3Y0 253 aa16.55■□□□□ 0.24
GTF2I-216ENST00000615596 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.55■□□□□ 0.24
GTF2I-216ENST00000615596 PLCD1P51178 756 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 LRRFIP1Q32MZ4 808 aaKnown RBP16.54■□□□□ 0.24
GTF2I-216ENST00000615596 APPBP2Q92624 585 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 OSBP2Q969R2 916 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 EHD4Q9H223 541 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 MCM9Q9NXL9 1143 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 AFG3L2Q9Y4W6 797 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 MYH1P12882 1939 aa16.54■□□□□ 0.24
GTF2I-216ENST00000615596 CXCL11O14625 94 aa16.53■□□□□ 0.24
GTF2I-216ENST00000615596 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
GTF2I-216ENST00000615596 CCDC84Q86UT8 332 aaPredicted RBP16.53■□□□□ 0.24
GTF2I-216ENST00000615596 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
GTF2I-216ENST00000615596 FAM43AQ8N2R8 423 aa16.53■□□□□ 0.24
GTF2I-216ENST00000615596 STRBPQ96SI9 672 aaKnown RBP16.53■□□□□ 0.24
GTF2I-216ENST00000615596 SLC4A4Q9Y6R1 1079 aa16.53■□□□□ 0.24
GTF2I-216ENST00000615596 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
GTF2I-216ENST00000615596 BTBD19C9JJ37 291 aa16.52■□□□□ 0.24
GTF2I-216ENST00000615596 JAG1P78504 1218 aa16.52■□□□□ 0.24
GTF2I-216ENST00000615596 EVX2Q03828 476 aa16.52■□□□□ 0.24
GTF2I-216ENST00000615596 MOGSQ13724 837 aa16.52■□□□□ 0.24
GTF2I-216ENST00000615596 NOM1Q5C9Z4 860 aaKnown RBP16.52■□□□□ 0.24
GTF2I-216ENST00000615596 TATDN1Q6P1N9 297 aa16.52■□□□□ 0.24
GTF2I-216ENST00000615596 EVI5LQ96CN4 794 aa16.52■□□□□ 0.24
GTF2I-216ENST00000615596 DDX60LQ5H9U9 1706 aaKnown RBP16.52■□□□□ 0.24
GTF2I-216ENST00000615596 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
GTF2I-216ENST00000615596 NAV1Q8NEY1 1877 aa16.51■□□□□ 0.23
GTF2I-216ENST00000615596 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
GTF2I-216ENST00000615596 M0R2C6 588 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms