RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 TAF1DQ9H5J8 278 aaPredicted RBP18.46■□□□□ 0.55
CCL3-206ENST00000614051 GGA3Q9NZ52 723 aa18.46■□□□□ 0.55
CCL3-206ENST00000614051 ZSCAN29Q8IWY8 852 aaPredicted RBP18.46■□□□□ 0.54
CCL3-206ENST00000614051 CDAN1Q8IWY9 1227 aa18.46■□□□□ 0.54
CCL3-206ENST00000614051 NKX2-3Q8TAU0 364 aa18.46■□□□□ 0.54
CCL3-206ENST00000614051 TMEM39BQ9GZU3 492 aa18.46■□□□□ 0.54
CCL3-206ENST00000614051 RRAGCQ9HB90 399 aa18.46■□□□□ 0.54
CCL3-206ENST00000614051 ANAPC4Q9UJX5 808 aa18.46■□□□□ 0.54
CCL3-206ENST00000614051 CPA1P15085 419 aa18.45■□□□□ 0.54
CCL3-206ENST00000614051 ANAPC15P60006 121 aa18.45■□□□□ 0.54
CCL3-206ENST00000614051 TSGA10IPQ3SY00 556 aa18.45■□□□□ 0.54
CCL3-206ENST00000614051 FKBP1CQ5VVH2 108 aa18.45■□□□□ 0.54
CCL3-206ENST00000614051 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
CCL3-206ENST00000614051 FAM151AQ8WW52 585 aa18.45■□□□□ 0.54
CCL3-206ENST00000614051 JAKMIP1Q96N16 626 aaKnown RBP18.45■□□□□ 0.54
CCL3-206ENST00000614051 NEDD4P46934 1319 aa18.44■□□□□ 0.54
CCL3-206ENST00000614051 IQCA1LA6NCM1 817 aa18.44■□□□□ 0.54
CCL3-206ENST00000614051 RASA3Q14644 834 aa18.44■□□□□ 0.54
CCL3-206ENST00000614051 EAPPQ56P03 285 aaPredicted RBP18.44■□□□□ 0.54
CCL3-206ENST00000614051 AKNAD1Q5T1N1 836 aa18.44■□□□□ 0.54
CCL3-206ENST00000614051 USP50Q70EL3 339 aaPredicted RBP18.44■□□□□ 0.54
CCL3-206ENST00000614051 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
CCL3-206ENST00000614051 MYH8P13535 1937 aa18.44■□□□□ 0.54
CCL3-206ENST00000614051 PRDM1O75626 825 aa18.43■□□□□ 0.54
CCL3-206ENST00000614051 FAM83AQ86UY5 434 aa18.43■□□□□ 0.54
CCL3-206ENST00000614051 STAG1Q8WVM7 1258 aa18.43■□□□□ 0.54
CCL3-206ENST00000614051 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
CCL3-206ENST00000614051 UPF3BQ9BZI7 483 aaKnown RBP18.43■□□□□ 0.54
CCL3-206ENST00000614051 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
CCL3-206ENST00000614051 CASTP20810 708 aaKnown RBP18.42■□□□□ 0.54
CCL3-206ENST00000614051 TNNI2P48788 182 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 RRP12Q5JTH9 1297 aaKnown RBP18.42■□□□□ 0.54
CCL3-206ENST00000614051 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 MFSD6Q6ZSS7 791 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 DEFB129Q9H1M3 183 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 TOMM22Q9NS69 142 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 PGAP2Q9UHJ9 254 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 ATRNL1Q5VV63 1379 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
CCL3-206ENST00000614051 COL2A1P02458 1487 aaPredicted RBP18.42■□□□□ 0.54
CCL3-206ENST00000614051 FAM196BA6NMK8 535 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 B4E1Z4 1266 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 HLA-DOAP06340 250 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 POTEIP0CG38 1075 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 POTEJP0CG39 1038 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 KRT32Q14532 448 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 PRAMEF18Q5VWM3 479 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 APOBEC3FQ8IUX4 373 aaKnown RBP18.41■□□□□ 0.54
CCL3-206ENST00000614051 NEK1Q96PY6 1258 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 CSRNP1Q96S65 589 aa18.41■□□□□ 0.54
CCL3-206ENST00000614051 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
CCL3-206ENST00000614051 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCL3-206ENST00000614051 SLC3A2P08195 630 aaKnown RBP18.4■□□□□ 0.54
CCL3-206ENST00000614051 CDK8P49336 464 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 IFFO2Q5TF58 517 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 C16orf86Q6ZW13 317 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 DNAJC5GQ8N7S2 189 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 SMC1BQ8NDV3 1235 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 TCEANC2Q96MN5 208 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 TEPSINQ96N21 525 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
CCL3-206ENST00000614051 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
CCL3-206ENST00000614051 GABPAQ06546 454 aa18.39■□□□□ 0.54
CCL3-206ENST00000614051 CYB5R4Q7L1T6 521 aa18.39■□□□□ 0.54
CCL3-206ENST00000614051 CHST3Q7LGC8 479 aa18.39■□□□□ 0.54
CCL3-206ENST00000614051 NCOA7Q8NI08 942 aa18.39■□□□□ 0.54
CCL3-206ENST00000614051 DCPSQ96C86 337 aaKnown RBP18.39■□□□□ 0.54
CCL3-206ENST00000614051 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.54
CCL3-206ENST00000614051 DNAJC18Q9H819 358 aa18.39■□□□□ 0.54
CCL3-206ENST00000614051 ZSWIM6Q9HCJ5 1215 aa18.39■□□□□ 0.54
CCL3-206ENST00000614051 SERPINB13Q9UIV8 391 aa18.39■□□□□ 0.54
CCL3-206ENST00000614051 PITPNM2Q9BZ72 1349 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 ADM5C9JUS6 153 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 FGRP09769 529 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 PSMA5P28066 241 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 PDE4BQ07343 736 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
CCL3-206ENST00000614051 NBPF12Q5TAG4 269 aaPredicted RBP18.39■□□□□ 0.53
CCL3-206ENST00000614051 BLOC1S2Q6QNY1 142 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 PNMA8AQ86V59 439 aaPredicted RBP18.39■□□□□ 0.53
CCL3-206ENST00000614051 MB21D2Q8IYB1 491 aaPredicted RBP18.39■□□□□ 0.53
CCL3-206ENST00000614051 CRACR2BQ8N4Y2 399 aaPredicted RBP18.39■□□□□ 0.53
CCL3-206ENST00000614051 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
CCL3-206ENST00000614051 ORC4O43929 436 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 RANBP6O60518 1105 aaKnown RBP18.38■□□□□ 0.53
CCL3-206ENST00000614051 KDM4AO75164 1064 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 NEK4P51957 841 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 TRDNQ13061 729 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 RABEP1Q15276 862 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 FAM47AQ5JRC9 791 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 MIGA2Q7L4E1 593 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
CCL3-206ENST00000614051 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 EHD4Q9H223 541 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 MKNK2Q9HBH9 465 aa18.38■□□□□ 0.53
CCL3-206ENST00000614051 CYP46A1Q9Y6A2 500 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms