RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 STAP2Q9UGK3 403 aa29.08■■■□□ 2.25
MMP28-203ENST00000612672 EVI5O60447 810 aa29.07■■■□□ 2.24
MMP28-203ENST00000612672 FAM110CQ1W6H9 321 aa29.07■■■□□ 2.24
MMP28-203ENST00000612672 TRMT2AQ8IZ69 625 aaKnown RBP29.07■■■□□ 2.24
MMP28-203ENST00000612672 TBC1D12O60347 775 aa29.06■■■□□ 2.24
MMP28-203ENST00000612672 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.06■■■□□ 2.24
MMP28-203ENST00000612672 HMG20BQ9P0W2 317 aa29.06■■■□□ 2.24
MMP28-203ENST00000612672 COL2A1P02458 1487 aaPredicted RBP29.05■■■□□ 2.24
MMP28-203ENST00000612672 SPP2Q13103 211 aa29.05■■■□□ 2.24
MMP28-203ENST00000612672 TBC1D9Q6ZT07 1266 aa29.05■■■□□ 2.24
MMP28-203ENST00000612672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.05■■■□□ 2.24
MMP28-203ENST00000612672 MYO5AQ9Y4I1 1855 aaKnown RBP29.05■■■□□ 2.24
MMP28-203ENST00000612672 LAMA2P24043 3122 aaKnown RBP29.04■■■□□ 2.24
MMP28-203ENST00000612672 DNAH12Q6ZR08 3092 aa29.04■■■□□ 2.24
MMP28-203ENST00000612672 MNX1P50219 401 aaPredicted RBP29.04■■■□□ 2.24
MMP28-203ENST00000612672 HMGCS2P54868 508 aa29.04■■■□□ 2.24
MMP28-203ENST00000612672 ERICH6Q7L0X2 663 aa29.04■■■□□ 2.24
MMP28-203ENST00000612672 PROCA1Q8NCQ7 364 aaPredicted RBP29.04■■■□□ 2.24
MMP28-203ENST00000612672 COA7Q96BR5 231 aa29.04■■■□□ 2.24
MMP28-203ENST00000612672 NSUN4Q96CB9 384 aaKnown RBP29.04■■■□□ 2.24
MMP28-203ENST00000612672 GJD2Q9UKL4 321 aa29.04■■■□□ 2.24
MMP28-203ENST00000612672 FOCADQ5VW36 1801 aa29.04■■■□□ 2.24
MMP28-203ENST00000612672 MAST2Q6P0Q8 1798 aa29.03■■■□□ 2.24
MMP28-203ENST00000612672 PEX10O60683 326 aa29.03■■■□□ 2.24
MMP28-203ENST00000612672 SPTY2D1Q68D10 685 aaPredicted RBP29.03■■■□□ 2.24
MMP28-203ENST00000612672 SLF2Q8IX21 1173 aa29.03■■■□□ 2.24
MMP28-203ENST00000612672 UNC80Q8N2C7 3258 aa29.02■■■□□ 2.24
MMP28-203ENST00000612672 NPM3O75607 178 aaKnown RBP29.02■■■□□ 2.24
MMP28-203ENST00000612672 OSBPL5Q9H0X9 879 aaPredicted RBP29.02■■■□□ 2.24
MMP28-203ENST00000612672 A0A1W2PPC1 479 aa29.01■■■□□ 2.23
MMP28-203ENST00000612672 JAG1P78504 1218 aa29.01■■■□□ 2.23
MMP28-203ENST00000612672 ZNF280CQ8ND82 737 aa29.01■■■□□ 2.23
MMP28-203ENST00000612672 ASCC2Q9H1I8 757 aaPredicted RBP29.01■■■□□ 2.23
MMP28-203ENST00000612672 PNMA3Q9UL41 463 aa29.01■■■□□ 2.23
MMP28-203ENST00000612672 CUL9Q8IWT3 2517 aa29■■■□□ 2.23
MMP28-203ENST00000612672 MVPQ14764 893 aaKnown RBP29■■■□□ 2.23
MMP28-203ENST00000612672 SHROOM1Q2M3G4 852 aaPredicted RBP29■■■□□ 2.23
MMP28-203ENST00000612672 SRGAP3O43295 1099 aa28.99■■■□□ 2.23
MMP28-203ENST00000612672 HMGCRP04035 888 aa28.99■■■□□ 2.23
MMP28-203ENST00000612672 CAP2P40123 477 aa28.99■■■□□ 2.23
MMP28-203ENST00000612672 C7orf61Q8IZ16 206 aa28.99■■■□□ 2.23
MMP28-203ENST00000612672 GDF15Q99988 308 aa28.99■■■□□ 2.23
MMP28-203ENST00000612672 API5Q9BZZ5 524 aaKnown RBP28.99■■■□□ 2.23
MMP28-203ENST00000612672 ZMYND8Q9ULU4 1186 aaPredicted RBP28.99■■■□□ 2.23
MMP28-203ENST00000612672 MTX1Q13505 466 aa28.98■■■□□ 2.23
MMP28-203ENST00000612672 NECAB2Q7Z6G3 386 aa28.98■■■□□ 2.23
MMP28-203ENST00000612672 SPATA5Q8NB90 893 aa28.98■■■□□ 2.23
MMP28-203ENST00000612672 TRIB2Q92519 343 aa28.98■■■□□ 2.23
MMP28-203ENST00000612672 NEUROD6Q96NK8 337 aa28.98■■■□□ 2.23
MMP28-203ENST00000612672 MCAMP43121 646 aa28.97■■■□□ 2.23
MMP28-203ENST00000612672 GCLCP48506 637 aaPredicted RBP28.97■■■□□ 2.23
MMP28-203ENST00000612672 SH3D19Q5HYK7 790 aa28.97■■■□□ 2.23
MMP28-203ENST00000612672 SH3RF3Q8TEJ3 882 aaPredicted RBP28.97■■■□□ 2.23
MMP28-203ENST00000612672 DNAJC18Q9H819 358 aa28.97■■■□□ 2.23
MMP28-203ENST00000612672 TNNQ9UQP3 1299 aa28.97■■■□□ 2.23
MMP28-203ENST00000612672 ARID4AP29374 1257 aaPredicted RBP28.96■■■□□ 2.23
MMP28-203ENST00000612672 AKAP2Q9Y2D5 859 aa28.96■■■□□ 2.23
MMP28-203ENST00000612672 FRMPD3Q5JV73 1810 aa28.95■■■□□ 2.23
MMP28-203ENST00000612672 USP17L5A8MUK1 530 aa28.95■■■□□ 2.22
MMP28-203ENST00000612672 TEX11Q8IYF3 940 aa28.95■■■□□ 2.22
MMP28-203ENST00000612672 TXNRD2Q9NNW7 524 aa28.95■■■□□ 2.22
MMP28-203ENST00000612672 RAI14Q9P0K7 980 aa28.95■■■□□ 2.22
MMP28-203ENST00000612672 MORF4L1Q9UBU8 362 aa28.95■■■□□ 2.22
MMP28-203ENST00000612672 RPTORQ8N122 1335 aa28.94■■■□□ 2.22
MMP28-203ENST00000612672 CAPN2P17655 700 aa28.94■■■□□ 2.22
MMP28-203ENST00000612672 ANKLE1Q8NAG6 615 aa28.94■■■□□ 2.22
MMP28-203ENST00000612672 SLC17A8Q8NDX2 589 aa28.94■■■□□ 2.22
MMP28-203ENST00000612672 SYN1P17600 705 aa28.93■■■□□ 2.22
MMP28-203ENST00000612672 RARSP54136 660 aaKnown RBP28.93■■■□□ 2.22
MMP28-203ENST00000612672 MTMR2Q13614 643 aa28.93■■■□□ 2.22
MMP28-203ENST00000612672 PFASO15067 1338 aa28.93■■■□□ 2.22
MMP28-203ENST00000612672 GSTO1P78417 241 aa28.92■■■□□ 2.22
MMP28-203ENST00000612672 MAP3K21Q5TCX8 1036 aa28.92■■■□□ 2.22
MMP28-203ENST00000612672 POTEEQ6S8J3 1075 aa28.92■■■□□ 2.22
MMP28-203ENST00000612672 ADGRA1Q86SQ6 560 aa28.92■■■□□ 2.22
MMP28-203ENST00000612672 P2RX7Q99572 595 aaKnown RBP28.92■■■□□ 2.22
MMP28-203ENST00000612672 HMX1Q9NP08 348 aaPredicted RBP28.92■■■□□ 2.22
MMP28-203ENST00000612672 PNMA6EA0A0J9YXQ4 647 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 DLL1O00548 723 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 MAP4K4O95819 1239 aaPredicted RBP28.91■■■□□ 2.22
MMP28-203ENST00000612672 LDHCP07864 332 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 CT47B1P0C2W7 299 aaPredicted RBP28.91■■■□□ 2.22
MMP28-203ENST00000612672 CYP2B6P20813 491 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 BMP8BP34820 402 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 TBC1D2Q9BYX2 928 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 OGDHLQ9ULD0 1010 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 HDAC5Q9UQL6 1122 aa28.91■■■□□ 2.22
MMP28-203ENST00000612672 PABPC4Q13310 644 aaKnown RBP eCLIP28.9■■■□□ 2.22
MMP28-203ENST00000612672 WDR18Q9BV38 432 aa28.9■■■□□ 2.22
MMP28-203ENST00000612672 NBPF3Q9H094 633 aa28.9■■■□□ 2.22
MMP28-203ENST00000612672 AATFQ9NY61 560 aaKnown RBP eCLIP28.9■■■□□ 2.22
MMP28-203ENST00000612672 HERC5Q9UII4 1024 aaKnown RBP28.9■■■□□ 2.22
MMP28-203ENST00000612672 MAGEA10P43363 369 aaPredicted RBP28.89■■■□□ 2.22
MMP28-203ENST00000612672 BACE1P56817 501 aa28.89■■■□□ 2.22
MMP28-203ENST00000612672 Q7L0L9 218 aa28.89■■■□□ 2.22
MMP28-203ENST00000612672 C11orf49Q9H6J7 331 aa28.89■■■□□ 2.22
MMP28-203ENST00000612672 SNRKQ9NRH2 765 aa28.89■■■□□ 2.22
MMP28-203ENST00000612672 EYSQ5T1H1 3165 aa28.89■■■□□ 2.22
MMP28-203ENST00000612672 GDF11O95390 407 aa28.88■■■□□ 2.21
MMP28-203ENST00000612672 GNAI3P08754 354 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms