RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 RGS22Q8NE09 1264 aa8.71□□□□□ -1.01
CBWD1-219ENST00000611457 MAP3K14Q99558 947 aa8.71□□□□□ -1.01
CBWD1-219ENST00000611457 PIH1D3Q9NQM4 214 aaKnown RBP8.71□□□□□ -1.01
CBWD1-219ENST00000611457 ECHDC1Q9NTX5 307 aa8.71□□□□□ -1.01
CBWD1-219ENST00000611457 ARPP21Q9UBL0 812 aaPredicted RBP8.71□□□□□ -1.01
CBWD1-219ENST00000611457 AGTPBP1Q9UPW5 1226 aa8.71□□□□□ -1.01
CBWD1-219ENST00000611457 TNNQ9UQP3 1299 aa8.71□□□□□ -1.01
CBWD1-219ENST00000611457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.01
CBWD1-219ENST00000611457 EIF5BO60841 1220 aaKnown RBP8.71□□□□□ -1.02
CBWD1-219ENST00000611457 HOXC6P09630 235 aa8.71□□□□□ -1.02
CBWD1-219ENST00000611457 SNAPC2Q13487 334 aa8.71□□□□□ -1.02
CBWD1-219ENST00000611457 OTUD7BQ6GQQ9 843 aa8.71□□□□□ -1.02
CBWD1-219ENST00000611457 B4GALNT3Q6L9W6 998 aa8.71□□□□□ -1.02
CBWD1-219ENST00000611457 GMCL1P1Q8NEA9 526 aa8.71□□□□□ -1.02
CBWD1-219ENST00000611457 ASTN2O75129 1339 aaPredicted RBP8.71□□□□□ -1.02
CBWD1-219ENST00000611457 CAP2P40123 477 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 CTU1Q7Z7A3 348 aaKnown RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 GPR101Q96P66 508 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 AS3MTQ9HBK9 375 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 TRAF5O00463 557 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 XRCC5P13010 732 aaKnown RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 PTPRAP18433 802 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 CLASRPQ8N2M8 674 aaKnown RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 MORC4Q8TE76 937 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 DAXXQ9UER7 740 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 HIP1O00291 1037 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 GLRX3O76003 335 aaKnown RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 BTDP43251 543 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 KIF23Q02241 960 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 FBXO46Q6PJ61 603 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 ZNF467Q7Z7K2 595 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 DBNDD2Q9BQY9 259 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 DNAJC18Q9H819 358 aa8.7□□□□□ -1.02
CBWD1-219ENST00000611457 DIS3Q9Y2L1 958 aaKnown RBP8.7□□□□□ -1.02
CBWD1-219ENST00000611457 MAP3K12Q12852 859 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 VGLL4Q14135 290 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 LPAR1Q92633 364 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
CBWD1-219ENST00000611457 DDX4Q9NQI0 724 aaKnown RBP8.69□□□□□ -1.02
CBWD1-219ENST00000611457 PA2G4Q9UQ80 394 aaKnown RBP8.69□□□□□ -1.02
CBWD1-219ENST00000611457 PRDX5P30044 214 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 PABPC4Q13310 644 aaKnown RBP eCLIP8.69□□□□□ -1.02
CBWD1-219ENST00000611457 APPBP2Q92624 585 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 PDE6AP16499 860 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 C1orf53Q5VUE5 145 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 MB21D1Q8N884 522 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
CBWD1-219ENST00000611457 AIDAQ96BJ3 306 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 CRISPLD2Q9H0B8 497 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 NYAP2Q9P242 653 aa8.69□□□□□ -1.02
CBWD1-219ENST00000611457 ERC2O15083 957 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 TLR2O60603 784 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 RCAN1P53805 252 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 USP14P54578 494 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 HUNKP57058 714 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 TTC39AQ5SRH9 613 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 MAP3K21Q5TCX8 1036 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 C12orf60Q5U649 245 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 BTNL9Q6UXG8 535 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 ITPRIPQ8IWB1 547 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 LOXHD1Q8IVV2 1947 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 RALGAPA2Q2PPJ7 1873 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 G3V3G9 751 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 GUCY1A2P33402 732 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 FAM110CQ1W6H9 321 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 CCDC178Q5BJE1 867 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 NBPF12Q5TAG4 269 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-219ENST00000611457 DCAF8Q5TAQ9 597 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 PAG1Q9NWQ8 432 aa8.68□□□□□ -1.02
CBWD1-219ENST00000611457 TCERG1O14776 1098 aaKnown RBP8.67□□□□□ -1.02
CBWD1-219ENST00000611457 FKTNO75072 461 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 SMARCA1P28370 1054 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 OLFML2BQ68BL8 750 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 TTC6Q86TZ1 520 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 BRI3BPQ8WY22 251 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 EVI5LQ96CN4 794 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 FRMPD4Q14CM0 1322 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 FOXP2O15409 715 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 SHMT1P34896 483 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 RGS3P49796 1198 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 TKFCQ3LXA3 575 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 EAPPQ56P03 285 aaPredicted RBP8.67□□□□□ -1.02
CBWD1-219ENST00000611457 ADGRA1Q86SQ6 560 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 KIAA0825Q8IV33 1275 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 REPS2Q8NFH8 660 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 KLHDC4Q8TBB5 520 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 PARK7Q99497 189 aaKnown RBP8.67□□□□□ -1.02
CBWD1-219ENST00000611457 PTPN18Q99952 460 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 USP40Q9NVE5 1235 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 ASNSP08243 561 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 GLIPR1L2Q4G1C9 344 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 NAA16Q6N069 864 aaPredicted RBP8.67□□□□□ -1.02
CBWD1-219ENST00000611457 STRBPQ96SI9 672 aaKnown RBP8.67□□□□□ -1.02
CBWD1-219ENST00000611457 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
CBWD1-219ENST00000611457 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms