RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
MUC1-222ENST00000610468 IGSF3O75054 1194 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 CAP2P40123 477 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 FLT3LGP49771 235 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
MUC1-222ENST00000610468 FAM110CQ1W6H9 321 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 TEX11Q8IYF3 940 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 ZNF280CQ8ND82 737 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 RNF208Q9H0X6 261 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 LRP2BPQ9P2M1 347 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 COLQQ9Y215 455 aaPredicted RBP17.1■□□□□ 0.33
MUC1-222ENST00000610468 PHIPQ8WWQ0 1821 aa17.1■□□□□ 0.33
MUC1-222ENST00000610468 AK9Q5TCS8 1911 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 TNPO2O14787 897 aaKnown RBP17.09■□□□□ 0.33
MUC1-222ENST00000610468 ADCY3O60266 1144 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 PPP4CP60510 307 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 SPP2Q13103 211 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
MUC1-222ENST00000610468 ZNF512BQ96KM6 892 aaPredicted RBP17.09■□□□□ 0.33
MUC1-222ENST00000610468 UNC93B1Q9H1C4 597 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 DHX36Q9H2U1 1008 aaKnown RBP17.09■□□□□ 0.33
MUC1-222ENST00000610468 BIN2Q9UBW5 565 aaPredicted RBP17.09■□□□□ 0.33
MUC1-222ENST00000610468 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
MUC1-222ENST00000610468 PTPRFP10586 1907 aa17.08■□□□□ 0.33
MUC1-222ENST00000610468 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.32
MUC1-222ENST00000610468 METTL16Q86W50 562 aaKnown RBP17.08■□□□□ 0.32
MUC1-222ENST00000610468 ANKRD13CQ8N6S4 541 aa17.08■□□□□ 0.32
MUC1-222ENST00000610468 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
MUC1-222ENST00000610468 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
MUC1-222ENST00000610468 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.32
MUC1-222ENST00000610468 CEP290O15078 2479 aa17.08■□□□□ 0.32
MUC1-222ENST00000610468 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.32
MUC1-222ENST00000610468 USP17L5A8MUK1 530 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 BAG3O95817 575 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 INHAP05111 366 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 CYP2E1P05181 493 aaPredicted RBP17.07■□□□□ 0.32
MUC1-222ENST00000610468 ELNP15502 786 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 PLCG2P16885 1265 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 CAPN2P17655 700 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 GCLCP48506 637 aaPredicted RBP17.07■□□□□ 0.32
MUC1-222ENST00000610468 HMGCS2P54868 508 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
MUC1-222ENST00000610468 WDR18Q9BV38 432 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 SNRKQ9NRH2 765 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
MUC1-222ENST00000610468 LOC285556D6RIA3 1793 aa17.07■□□□□ 0.32
MUC1-222ENST00000610468 FLT1P17948 1338 aa17.06■□□□□ 0.32
MUC1-222ENST00000610468 SGPL1O95470 568 aa17.06■□□□□ 0.32
MUC1-222ENST00000610468 PABPC4Q13310 644 aaKnown RBP eCLIP17.06■□□□□ 0.327e-9■■■□□ 14.9
MUC1-222ENST00000610468 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
MUC1-222ENST00000610468 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
MUC1-222ENST00000610468 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
MUC1-222ENST00000610468 NOL10Q9BSC4 688 aaKnown RBP17.06■□□□□ 0.32
MUC1-222ENST00000610468 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
MUC1-222ENST00000610468 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
MUC1-222ENST00000610468 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
MUC1-222ENST00000610468 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
MUC1-222ENST00000610468 COA7Q96BR5 231 aa17.05■□□□□ 0.32
MUC1-222ENST00000610468 HTATIP2Q9BUP3 242 aa17.05■□□□□ 0.32
MUC1-222ENST00000610468 ASCC2Q9H1I8 757 aaPredicted RBP17.05■□□□□ 0.32
MUC1-222ENST00000610468 AS3MTQ9HBK9 375 aa17.05■□□□□ 0.32
MUC1-222ENST00000610468 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
MUC1-222ENST00000610468 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
MUC1-222ENST00000610468 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
MUC1-222ENST00000610468 ASNSP08243 561 aa17.04■□□□□ 0.32
MUC1-222ENST00000610468 JAG1P78504 1218 aa17.04■□□□□ 0.32
MUC1-222ENST00000610468 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
MUC1-222ENST00000610468 DPF3Q92784 378 aa17.04■□□□□ 0.32
MUC1-222ENST00000610468 CRISPLD2Q9H0B8 497 aa17.04■□□□□ 0.32
MUC1-222ENST00000610468 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
MUC1-222ENST00000610468 MORF4L1Q9UBU8 362 aa17.04■□□□□ 0.32
MUC1-222ENST00000610468 MGAMO43451 1857 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 ZBTB7BO15156 539 aaPredicted RBP17.03■□□□□ 0.32
MUC1-222ENST00000610468 RLBP1P12271 317 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 HOXA7P31268 230 aaPredicted RBP17.03■□□□□ 0.32
MUC1-222ENST00000610468 ZAP70P43403 619 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 BACE1P56817 501 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 MTMR2Q13614 643 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 FOXP4Q8IVH2 680 aaPredicted RBP17.03■□□□□ 0.32
MUC1-222ENST00000610468 MAPKAPK5Q8IW41 473 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 PRO3102Q9H379 93 aa17.03■□□□□ 0.32
MUC1-222ENST00000610468 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
MUC1-222ENST00000610468 TRIOBPQ9H2D6 2365 aa17.02■□□□□ 0.32
MUC1-222ENST00000610468 CHRDL2Q6WN34 429 aa17.02■□□□□ 0.32
MUC1-222ENST00000610468 DEFB118Q96PH6 123 aa17.02■□□□□ 0.32
MUC1-222ENST00000610468 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.32
MUC1-222ENST00000610468 TLR7Q9NYK1 1049 aaKnown RBP17.02■□□□□ 0.32
MUC1-222ENST00000610468 GJD2Q9UKL4 321 aa17.02■□□□□ 0.32
MUC1-222ENST00000610468 SIPA1L1O43166 1804 aa17.02■□□□□ 0.31
MUC1-222ENST00000610468 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
MUC1-222ENST00000610468 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
MUC1-222ENST00000610468 PALD1Q9ULE6 856 aa17.01■□□□□ 0.31
MUC1-222ENST00000610468 ZBTB21Q9ULJ3 1066 aa17.01■□□□□ 0.31
MUC1-222ENST00000610468 C19orf81C9J6K1 198 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms