RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 ZHX2Q9Y6X8 837 aa18.32■□□□□ 0.52
LMBR1-220ENST00000609081 CCDC85CA6NKD9 419 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 GOLIM4O00461 696 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 TLR2O60603 784 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 CAP2P40123 477 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 MAPKAPK5Q8IW41 473 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 DNAJC2Q99543 621 aaKnown RBP18.31■□□□□ 0.52
LMBR1-220ENST00000609081 HAUS7Q99871 368 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 PAG1Q9NWQ8 432 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 NDUFB9Q9Y6M9 179 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 MYH1P12882 1939 aa18.31■□□□□ 0.52
LMBR1-220ENST00000609081 PHIPQ8WWQ0 1821 aa18.3■□□□□ 0.52
LMBR1-220ENST00000609081 PTPRFP10586 1907 aa18.3■□□□□ 0.52
LMBR1-220ENST00000609081 PDE6AP16499 860 aa18.3■□□□□ 0.52
LMBR1-220ENST00000609081 USP5P45974 858 aa18.3■□□□□ 0.52
LMBR1-220ENST00000609081 SLC45A1Q9Y2W3 748 aa18.3■□□□□ 0.52
LMBR1-220ENST00000609081 AFG3L2Q9Y4W6 797 aa18.3■□□□□ 0.52
LMBR1-220ENST00000609081 ATAD5Q96QE3 1844 aa18.3■□□□□ 0.52
LMBR1-220ENST00000609081 A0A0G2JLL6 359 aaPredicted RBP18.29■□□□□ 0.52
LMBR1-220ENST00000609081 MAGEB6P1A0A0J9YX57 407 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
LMBR1-220ENST00000609081 ZSCAN25Q6NSZ9 544 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 PRRT2Q7Z6L0 340 aaPredicted RBP18.29■□□□□ 0.52
LMBR1-220ENST00000609081 TTC6Q86TZ1 520 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
LMBR1-220ENST00000609081 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 CRNKL1Q9BZJ0 848 aaKnown RBP18.29■□□□□ 0.52
LMBR1-220ENST00000609081 BOLA2Q9H3K6 86 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 ECHDC1Q9NTX5 307 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 MYH7P12883 1935 aa18.29■□□□□ 0.52
LMBR1-220ENST00000609081 SIPA1L1O43166 1804 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 PDHXO00330 501 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 ASNSP08243 561 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 MOGSQ13724 837 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 PARK7Q99497 189 aaKnown RBP18.28■□□□□ 0.52
LMBR1-220ENST00000609081 RIOK1Q9BRS2 568 aaKnown RBP18.28■□□□□ 0.52
LMBR1-220ENST00000609081 EHD4Q9H223 541 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 AS3MTQ9HBK9 375 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 PALD1Q9ULE6 856 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 TRIM17Q9Y577 477 aa18.28■□□□□ 0.52
LMBR1-220ENST00000609081 ZNF532Q9HCE3 1301 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 GNRH1P01148 92 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 KIF22Q14807 665 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 OTOP1Q7RTM1 612 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 PCDHB15Q9Y5E8 787 aa18.27■□□□□ 0.52
LMBR1-220ENST00000609081 TCRBV5S4A2TA0A5A2 114 aa18.26■□□□□ 0.51
LMBR1-220ENST00000609081 FAM196BA6NMK8 535 aa18.26■□□□□ 0.51
LMBR1-220ENST00000609081 USP17L5A8MUK1 530 aa18.26■□□□□ 0.51
LMBR1-220ENST00000609081 UBE3CQ15386 1083 aa18.26■□□□□ 0.51
LMBR1-220ENST00000609081 PROCA1Q8NCQ7 364 aaPredicted RBP18.26■□□□□ 0.51
LMBR1-220ENST00000609081 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
LMBR1-220ENST00000609081 SERPINB13Q9UIV8 391 aa18.26■□□□□ 0.51
LMBR1-220ENST00000609081 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
LMBR1-220ENST00000609081 ADD2P35612 726 aa18.25■□□□□ 0.51
LMBR1-220ENST00000609081 CD99L2Q8TCZ2 262 aa18.25■□□□□ 0.51
LMBR1-220ENST00000609081 SAP30BPQ9UHR5 308 aaKnown RBP18.25■□□□□ 0.51
LMBR1-220ENST00000609081 TTC41PQ6P2S7 1318 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 NAV1Q8NEY1 1877 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 RGS19P49795 217 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 PRMT2P55345 433 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
LMBR1-220ENST00000609081 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
LMBR1-220ENST00000609081 GPAT2Q6NUI2 795 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 C17orf99Q6UX52 265 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 GADL1Q6ZQY3 521 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 CRBNQ96SW2 442 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 WDR18Q9BV38 432 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 DNAJC18Q9H819 358 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
LMBR1-220ENST00000609081 PNMA3Q9UL41 463 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
LMBR1-220ENST00000609081 DDX60LQ5H9U9 1706 aaKnown RBP18.23■□□□□ 0.51
LMBR1-220ENST00000609081 LOC285556D6RIA3 1793 aa18.23■□□□□ 0.51
LMBR1-220ENST00000609081 ERC2O15083 957 aa18.23■□□□□ 0.51
LMBR1-220ENST00000609081 SPP2Q13103 211 aa18.23■□□□□ 0.51
LMBR1-220ENST00000609081 HDAC1Q13547 482 aaPredicted RBP18.23■□□□□ 0.51
LMBR1-220ENST00000609081 LRRFIP1Q32MZ4 808 aaKnown RBP18.23■□□□□ 0.51
LMBR1-220ENST00000609081 GCC1Q96CN9 775 aa18.23■□□□□ 0.51
LMBR1-220ENST00000609081 EDC3Q96F86 508 aaKnown RBP18.23■□□□□ 0.51
LMBR1-220ENST00000609081 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
LMBR1-220ENST00000609081 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
LMBR1-220ENST00000609081 ADGRA2Q96PE1 1338 aa18.23■□□□□ 0.51
LMBR1-220ENST00000609081 C19orf81C9J6K1 198 aa18.22■□□□□ 0.51
LMBR1-220ENST00000609081 SH3D19Q5HYK7 790 aa18.22■□□□□ 0.51
LMBR1-220ENST00000609081 TATDN1Q6P1N9 297 aa18.22■□□□□ 0.51
LMBR1-220ENST00000609081 DDRGK1Q96HY6 314 aa18.22■□□□□ 0.51
LMBR1-220ENST00000609081 POLR3DP05423 398 aaPredicted RBP18.21■□□□□ 0.51
LMBR1-220ENST00000609081 ZFYP08048 801 aaPredicted RBP18.21■□□□□ 0.51
LMBR1-220ENST00000609081 RRP1BQ14684 758 aaKnown RBP18.21■□□□□ 0.51
LMBR1-220ENST00000609081 AMOTL1Q8IY63 956 aa18.21■□□□□ 0.51
LMBR1-220ENST00000609081 KBTBD3Q8NAB2 608 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms