RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 SLC45A1Q9Y2W3 748 aa26.82■■□□□ 1.88
TMEM248-207ENST00000607045 NOP58Q9Y2X3 529 aaKnown RBP26.82■■□□□ 1.88
TMEM248-207ENST00000607045 ITPRIPQ8IWB1 547 aa26.81■■□□□ 1.88
TMEM248-207ENST00000607045 FTSJ3Q8IY81 847 aaKnown RBP26.81■■□□□ 1.88
TMEM248-207ENST00000607045 CCDC8Q9H0W5 538 aaPredicted RBP26.81■■□□□ 1.88
TMEM248-207ENST00000607045 RBBP6Q7Z6E9 1792 aaKnown RBP26.81■■□□□ 1.88
TMEM248-207ENST00000607045 CAP2P40123 477 aa26.8■■□□□ 1.88
TMEM248-207ENST00000607045 ZAP70P43403 619 aa26.8■■□□□ 1.88
TMEM248-207ENST00000607045 PPP4CP60510 307 aa26.8■■□□□ 1.88
TMEM248-207ENST00000607045 TLR7Q9NYK1 1049 aaKnown RBP26.8■■□□□ 1.88
TMEM248-207ENST00000607045 BIN2Q9UBW5 565 aaPredicted RBP26.8■■□□□ 1.88
TMEM248-207ENST00000607045 DOCK2Q92608 1830 aa26.8■■□□□ 1.88
TMEM248-207ENST00000607045 CEP290O15078 2479 aa26.79■■□□□ 1.88
TMEM248-207ENST00000607045 TGFBRAP1Q8WUH2 860 aa26.79■■□□□ 1.88
TMEM248-207ENST00000607045 EAF2Q96CJ1 260 aaPredicted RBP26.79■■□□□ 1.88
TMEM248-207ENST00000607045 PIH1D3Q9NQM4 214 aaKnown RBP26.79■■□□□ 1.88
TMEM248-207ENST00000607045 DBNLQ9UJU6 430 aaKnown RBP26.79■■□□□ 1.88
TMEM248-207ENST00000607045 AGTPBP1Q9UPW5 1226 aa26.79■■□□□ 1.88
TMEM248-207ENST00000607045 BAG3O95817 575 aa26.78■■□□□ 1.88
TMEM248-207ENST00000607045 CCL5P13501 91 aa26.78■■□□□ 1.88
TMEM248-207ENST00000607045 MAPKAPK5Q8IW41 473 aa26.78■■□□□ 1.88
TMEM248-207ENST00000607045 ZNF280CQ8ND82 737 aa26.78■■□□□ 1.88
TMEM248-207ENST00000607045 SMCR8Q8TEV9 937 aaPredicted RBP26.78■■□□□ 1.88
TMEM248-207ENST00000607045 GCC1Q96CN9 775 aa26.78■■□□□ 1.88
TMEM248-207ENST00000607045 SHISA4Q96DD7 197 aa26.78■■□□□ 1.88
TMEM248-207ENST00000607045 ZNF512BQ96KM6 892 aaPredicted RBP26.78■■□□□ 1.88
TMEM248-207ENST00000607045 NOL10Q9BSC4 688 aaKnown RBP26.78■■□□□ 1.88
TMEM248-207ENST00000607045 PI4KBQ9UBF8 816 aa26.78■■□□□ 1.88
TMEM248-207ENST00000607045 FLT3LGP49771 235 aa26.77■■□□□ 1.88
TMEM248-207ENST00000607045 JAG1P78504 1218 aa26.77■■□□□ 1.88
TMEM248-207ENST00000607045 HABP4Q5JVS0 413 aaKnown RBP26.77■■□□□ 1.88
TMEM248-207ENST00000607045 ANKRD13CQ8N6S4 541 aa26.77■■□□□ 1.88
TMEM248-207ENST00000607045 HMGCS2P54868 508 aa26.76■■□□□ 1.87
TMEM248-207ENST00000607045 RNF208Q9H0X6 261 aa26.76■■□□□ 1.87
TMEM248-207ENST00000607045 HERC5Q9UII4 1024 aaKnown RBP26.76■■□□□ 1.87
TMEM248-207ENST00000607045 USP17L5A8MUK1 530 aa26.75■■□□□ 1.87
TMEM248-207ENST00000607045 DYNLL1P63167 89 aaKnown RBP26.75■■□□□ 1.87
TMEM248-207ENST00000607045 DIEXFQ68CQ4 756 aaKnown RBP26.75■■□□□ 1.87
TMEM248-207ENST00000607045 DHX36Q9H2U1 1008 aaKnown RBP26.75■■□□□ 1.87
TMEM248-207ENST00000607045 PALD1Q9ULE6 856 aa26.75■■□□□ 1.87
TMEM248-207ENST00000607045 NDUFB9Q9Y6M9 179 aa26.75■■□□□ 1.87
TMEM248-207ENST00000607045 PHIPQ8WWQ0 1821 aa26.74■■□□□ 1.87
TMEM248-207ENST00000607045 TNPO2O14787 897 aaKnown RBP26.74■■□□□ 1.87
TMEM248-207ENST00000607045 ADCY3O60266 1144 aa26.74■■□□□ 1.87
TMEM248-207ENST00000607045 GJB1P08034 283 aa26.74■■□□□ 1.87
TMEM248-207ENST00000607045 ELNP15502 786 aa26.74■■□□□ 1.87
TMEM248-207ENST00000607045 SHROOM1Q2M3G4 852 aaPredicted RBP26.74■■□□□ 1.87
TMEM248-207ENST00000607045 CEP85Q6P2H3 762 aa26.74■■□□□ 1.87
TMEM248-207ENST00000607045 PROCA1Q8NCQ7 364 aaPredicted RBP26.74■■□□□ 1.87
TMEM248-207ENST00000607045 PANK1Q8TE04 598 aa26.74■■□□□ 1.87
TMEM248-207ENST00000607045 COL2A1P02458 1487 aaPredicted RBP26.74■■□□□ 1.87
TMEM248-207ENST00000607045 PLCG2P16885 1265 aa26.73■■□□□ 1.87
TMEM248-207ENST00000607045 GJA8P48165 433 aa26.73■■□□□ 1.87
TMEM248-207ENST00000607045 FOXP4Q8IVH2 680 aaPredicted RBP26.73■■□□□ 1.87
TMEM248-207ENST00000607045 UNC93B1Q9H1C4 597 aa26.73■■□□□ 1.87
TMEM248-207ENST00000607045 DNAJC18Q9H819 358 aa26.73■■□□□ 1.87
TMEM248-207ENST00000607045 DOCK1Q14185 1865 aa26.72■■□□□ 1.87
TMEM248-207ENST00000607045 FLT1P17948 1338 aa26.72■■□□□ 1.87
TMEM248-207ENST00000607045 CYP7A1P22680 504 aa26.72■■□□□ 1.87
TMEM248-207ENST00000607045 UBXN2AP68543 259 aa26.72■■□□□ 1.87
TMEM248-207ENST00000607045 SLAIN1Q8ND83 568 aa26.72■■□□□ 1.87
TMEM248-207ENST00000607045 PCDH10Q9P2E7 1040 aa26.72■■□□□ 1.87
TMEM248-207ENST00000607045 SAP30BPQ9UHR5 308 aaKnown RBP26.72■■□□□ 1.87
TMEM248-207ENST00000607045 H0YGN5 161 aa26.71■■□□□ 1.87
TMEM248-207ENST00000607045 SH3D19Q5HYK7 790 aa26.71■■□□□ 1.87
TMEM248-207ENST00000607045 METTL16Q86W50 562 aaKnown RBP26.71■■□□□ 1.87
TMEM248-207ENST00000607045 ASCC2Q9H1I8 757 aaPredicted RBP26.71■■□□□ 1.87
TMEM248-207ENST00000607045 PNMA3Q9UL41 463 aa26.71■■□□□ 1.87
TMEM248-207ENST00000607045 EXOC6BQ9Y2D4 811 aa26.71■■□□□ 1.87
TMEM248-207ENST00000607045 NKX2-3Q8TAU0 364 aa26.7■■□□□ 1.86
TMEM248-207ENST00000607045 WDR18Q9BV38 432 aa26.7■■□□□ 1.86
TMEM248-207ENST00000607045 TBC1D2Q9BYX2 928 aa26.7■■□□□ 1.86
TMEM248-207ENST00000607045 ANTXR1Q9H6X2 564 aa26.7■■□□□ 1.86
TMEM248-207ENST00000607045 COLQQ9Y215 455 aaPredicted RBP26.7■■□□□ 1.86
TMEM248-207ENST00000607045 PTPRFP10586 1907 aa26.7■■□□□ 1.86
TMEM248-207ENST00000607045 IDH1O75874 414 aaKnown RBP26.69■■□□□ 1.86
TMEM248-207ENST00000607045 GDF11O95390 407 aa26.69■■□□□ 1.86
TMEM248-207ENST00000607045 FAM110CQ1W6H9 321 aa26.69■■□□□ 1.86
TMEM248-207ENST00000607045 UBE2Q1Q7Z7E8 422 aa26.69■■□□□ 1.86
TMEM248-207ENST00000607045 MIGA1Q8NAN2 632 aa26.69■■□□□ 1.86
TMEM248-207ENST00000607045 AS3MTQ9HBK9 375 aa26.69■■□□□ 1.86
TMEM248-207ENST00000607045 TAOK2Q9UL54 1235 aa26.69■■□□□ 1.86
TMEM248-207ENST00000607045 RANBP2P49792 3224 aaKnown RBP26.68■■□□□ 1.86
TMEM248-207ENST00000607045 INHAP05111 366 aa26.68■■□□□ 1.86
TMEM248-207ENST00000607045 BACE1P56817 501 aa26.68■■□□□ 1.86
TMEM248-207ENST00000607045 IRF5Q13568 498 aa26.68■■□□□ 1.86
TMEM248-207ENST00000607045 MTMR2Q13614 643 aa26.68■■□□□ 1.86
TMEM248-207ENST00000607045 CRACR2BQ8N4Y2 399 aaPredicted RBP26.68■■□□□ 1.86
TMEM248-207ENST00000607045 PXYLP1Q8TE99 480 aa26.68■■□□□ 1.86
TMEM248-207ENST00000607045 U2AF1L4Q8WU68 220 aaKnown RBP26.68■■□□□ 1.86
TMEM248-207ENST00000607045 DPF3Q92784 378 aa26.68■■□□□ 1.86
TMEM248-207ENST00000607045 COA7Q96BR5 231 aa26.68■■□□□ 1.86
TMEM248-207ENST00000607045 DOCK3Q8IZD9 2030 aa26.67■■□□□ 1.86
TMEM248-207ENST00000607045 PEX10O60683 326 aa26.67■■□□□ 1.86
TMEM248-207ENST00000607045 ASNSP08243 561 aa26.67■■□□□ 1.86
TMEM248-207ENST00000607045 GCLCP48506 637 aaPredicted RBP26.67■■□□□ 1.86
TMEM248-207ENST00000607045 PABPC4Q13310 644 aaKnown RBP eCLIP26.67■■□□□ 1.86
TMEM248-207ENST00000607045 MAGEB6Q8N7X4 407 aa26.67■■□□□ 1.86
TMEM248-207ENST00000607045 P2RX7Q99572 595 aaKnown RBP26.67■■□□□ 1.86
TMEM248-207ENST00000607045 SGPL1O95470 568 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms