RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 RASGRF1Q13972 1273 aa18.61■□□□□ 0.57
SSBP4-214ENST00000607020 CCDC84Q86UT8 332 aaPredicted RBP18.61■□□□□ 0.57
SSBP4-214ENST00000607020 ASCC2Q9H1I8 757 aaPredicted RBP18.61■□□□□ 0.57
SSBP4-214ENST00000607020 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.61■□□□□ 0.57
SSBP4-214ENST00000607020 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
SSBP4-214ENST00000607020 XRCC5P13010 732 aaKnown RBP18.6■□□□□ 0.57
SSBP4-214ENST00000607020 MAGEA10P43363 369 aaPredicted RBP18.6■□□□□ 0.57
SSBP4-214ENST00000607020 PICALMQ13492 652 aa18.6■□□□□ 0.57
SSBP4-214ENST00000607020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.6■□□□□ 0.57
SSBP4-214ENST00000607020 COPRSQ9NQ92 184 aa18.6■□□□□ 0.57
SSBP4-214ENST00000607020 ABCF2Q9UG63 623 aa18.6■□□□□ 0.57
SSBP4-214ENST00000607020 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
SSBP4-214ENST00000607020 ANP32CO43423 234 aa18.59■□□□□ 0.57
SSBP4-214ENST00000607020 ADORA1P30542 326 aa18.59■□□□□ 0.57
SSBP4-214ENST00000607020 CAP2P40123 477 aa18.59■□□□□ 0.57
SSBP4-214ENST00000607020 TRIM32Q13049 653 aa18.59■□□□□ 0.57
SSBP4-214ENST00000607020 USP17L5A8MUK1 530 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-214ENST00000607020 COL6A1P12109 1028 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 HMGCS2P54868 508 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 MECOMQ03112 1051 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 ZNF384Q8TF68 577 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 TRIB2Q92519 343 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 WDR18Q9BV38 432 aa18.58■□□□□ 0.56
SSBP4-214ENST00000607020 LDHCP07864 332 aa18.57■□□□□ 0.56
SSBP4-214ENST00000607020 HOXA7P31268 230 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-214ENST00000607020 TIMM10P62072 90 aa18.57■□□□□ 0.56
SSBP4-214ENST00000607020 Q7L0L9 218 aa18.57■□□□□ 0.56
SSBP4-214ENST00000607020 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
SSBP4-214ENST00000607020 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
SSBP4-214ENST00000607020 COL2A1P02458 1487 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-214ENST00000607020 PFASO15067 1338 aa18.56■□□□□ 0.56
SSBP4-214ENST00000607020 SYN1P17600 705 aa18.56■□□□□ 0.56
SSBP4-214ENST00000607020 RRP1BQ14684 758 aaKnown RBP18.56■□□□□ 0.56
SSBP4-214ENST00000607020 FAM109BQ6ICB4 259 aaPredicted RBP18.56■□□□□ 0.56
SSBP4-214ENST00000607020 UBE2OQ9C0C9 1292 aaKnown RBP18.56■□□□□ 0.56
SSBP4-214ENST00000607020 AS3MTQ9HBK9 375 aa18.56■□□□□ 0.56
SSBP4-214ENST00000607020 HERC5Q9UII4 1024 aaKnown RBP18.56■□□□□ 0.56
SSBP4-214ENST00000607020 PA2G4Q9UQ80 394 aaKnown RBP18.56■□□□□ 0.56
SSBP4-214ENST00000607020 MGAMO43451 1857 aa18.56■□□□□ 0.56
SSBP4-214ENST00000607020 FAM196BA6NMK8 535 aa18.55■□□□□ 0.56
SSBP4-214ENST00000607020 E9PSI1 815 aa18.55■□□□□ 0.56
SSBP4-214ENST00000607020 PRKAR2AP13861 404 aaKnown RBP18.55■□□□□ 0.56
SSBP4-214ENST00000607020 GSTO1P78417 241 aa18.55■□□□□ 0.56
SSBP4-214ENST00000607020 MVPQ14764 893 aaKnown RBP18.55■□□□□ 0.56
SSBP4-214ENST00000607020 SOCS4Q8WXH5 440 aa18.55■□□□□ 0.56
SSBP4-214ENST00000607020 USP6NLQ92738 828 aa18.55■□□□□ 0.56
SSBP4-214ENST00000607020 NUDT12Q9BQG2 462 aa18.55■□□□□ 0.56
SSBP4-214ENST00000607020 AKAP2Q9Y2D5 859 aa18.55■□□□□ 0.56
SSBP4-214ENST00000607020 CYP2B6P20813 491 aa18.54■□□□□ 0.56
SSBP4-214ENST00000607020 BACE1P56817 501 aa18.54■□□□□ 0.56
SSBP4-214ENST00000607020 GPRC5AQ8NFJ5 357 aa18.54■□□□□ 0.56
SSBP4-214ENST00000607020 NSUN4Q96CB9 384 aaKnown RBP18.54■□□□□ 0.56
SSBP4-214ENST00000607020 XAGE2Q96GT9 111 aa18.54■□□□□ 0.56
SSBP4-214ENST00000607020 P2RX7Q99572 595 aaKnown RBP18.54■□□□□ 0.56
SSBP4-214ENST00000607020 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
SSBP4-214ENST00000607020 C19orf81C9J6K1 198 aa18.53■□□□□ 0.56
SSBP4-214ENST00000607020 POTEB2H3BUK9 544 aa18.53■□□□□ 0.56
SSBP4-214ENST00000607020 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-214ENST00000607020 LHX8Q68G74 356 aa18.53■□□□□ 0.56
SSBP4-214ENST00000607020 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
SSBP4-214ENST00000607020 GINM1Q9NU53 330 aa18.53■□□□□ 0.56
SSBP4-214ENST00000607020 PI4KBQ9UBF8 816 aa18.53■□□□□ 0.56
SSBP4-214ENST00000607020 MAPK4P31152 587 aa18.52■□□□□ 0.56
SSBP4-214ENST00000607020 CACNB2Q08289 660 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-214ENST00000607020 METTL16Q86W50 562 aaKnown RBP18.52■□□□□ 0.56
SSBP4-214ENST00000607020 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.56
SSBP4-214ENST00000607020 TXNRD2Q9NNW7 524 aa18.52■□□□□ 0.56
SSBP4-214ENST00000607020 HMG20BQ9P0W2 317 aa18.52■□□□□ 0.56
SSBP4-214ENST00000607020 RBPJLQ9UBG7 517 aa18.52■□□□□ 0.56
SSBP4-214ENST00000607020 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
SSBP4-214ENST00000607020 ASNSP08243 561 aa18.51■□□□□ 0.55
SSBP4-214ENST00000607020 HERVK_113P62684 666 aa18.51■□□□□ 0.55
SSBP4-214ENST00000607020 SLFN5Q08AF3 891 aa18.51■□□□□ 0.55
SSBP4-214ENST00000607020 GTF3C2Q8WUA4 911 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-214ENST00000607020 TMOD4Q9NZQ9 345 aa18.51■□□□□ 0.55
SSBP4-214ENST00000607020 ZKSCAN1P17029 563 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-214ENST00000607020 TFCP2Q12800 502 aa18.5■□□□□ 0.55
SSBP4-214ENST00000607020 MTMR2Q13614 643 aa18.5■□□□□ 0.55
SSBP4-214ENST00000607020 PDE3AQ14432 1141 aa18.5■□□□□ 0.55
SSBP4-214ENST00000607020 LRRC26Q2I0M4 334 aa18.5■□□□□ 0.55
SSBP4-214ENST00000607020 MORN1Q5T089 497 aa18.5■□□□□ 0.55
SSBP4-214ENST00000607020 FOXP4Q8IVH2 680 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-214ENST00000607020 SPATA5Q8NB90 893 aa18.5■□□□□ 0.55
SSBP4-214ENST00000607020 COL25A1Q9BXS0 654 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-214ENST00000607020 PHIPQ8WWQ0 1821 aa18.5■□□□□ 0.55
SSBP4-214ENST00000607020 DOCK2Q92608 1830 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 RGS2P41220 211 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 MTX1Q13505 466 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 Q3C1V9 767 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 SMC4Q9NTJ3 1288 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 DOCK1Q14185 1865 aa18.49■□□□□ 0.55
SSBP4-214ENST00000607020 USP17L10C9JJH3 530 aa18.48■□□□□ 0.55
SSBP4-214ENST00000607020 ARID4AP29374 1257 aaPredicted RBP18.48■□□□□ 0.55
SSBP4-214ENST00000607020 PPP4CP60510 307 aa18.48■□□□□ 0.55
SSBP4-214ENST00000607020 ERVK-9P63128 1117 aa18.48■□□□□ 0.55
SSBP4-214ENST00000607020 ERVK-24P63145 666 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms