RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 FLT1P17948 1338 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 PTPDC1A2A3K4 754 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 CCDC69A6NI79 296 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 GOLGA6L22H0YM25 854 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 IQCA1Q86XH1 822 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 MTMR6Q9Y217 621 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 SLC12A7Q9Y666 1083 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 SCN9AQ15858 1988 aa25.29■■□□□ 1.64
USP6NL-204ENST00000606752 ROBO3Q96MS0 1386 aa25.29■■□□□ 1.64
USP6NL-204ENST00000606752 APOBEC3HQ6NTF7 200 aaKnown RBP25.29■■□□□ 1.64
USP6NL-204ENST00000606752 FAM184AQ8NB25 1140 aa25.29■■□□□ 1.64
USP6NL-204ENST00000606752 DDX11Q96FC9 970 aa25.29■■□□□ 1.64
USP6NL-204ENST00000606752 ZDHHC15Q96MV8 337 aa25.29■■□□□ 1.64
USP6NL-204ENST00000606752 USP40Q9NVE5 1235 aa25.29■■□□□ 1.64
USP6NL-204ENST00000606752 SAP30BPQ9UHR5 308 aaKnown RBP25.29■■□□□ 1.64
USP6NL-204ENST00000606752 KIF3AQ9Y496 699 aa25.29■■□□□ 1.64
USP6NL-204ENST00000606752 ZBTB43O43298 467 aa25.28■■□□□ 1.64
USP6NL-204ENST00000606752 METAP2P50579 478 aaKnown RBP eCLIP25.28■■□□□ 1.64
USP6NL-204ENST00000606752 SEC23AQ15436 765 aa25.28■■□□□ 1.64
USP6NL-204ENST00000606752 SLC4A8Q2Y0W8 1093 aa25.28■■□□□ 1.64
USP6NL-204ENST00000606752 SYNE3Q6ZMZ3 975 aa25.28■■□□□ 1.64
USP6NL-204ENST00000606752 ZSCAN10Q96SZ4 725 aaPredicted RBP25.28■■□□□ 1.64
USP6NL-204ENST00000606752 PTMSP20962 102 aa25.28■■□□□ 1.64
USP6NL-204ENST00000606752 PLCD1P51178 756 aa25.28■■□□□ 1.64
USP6NL-204ENST00000606752 TNKSO95271 1327 aa25.27■■□□□ 1.64
USP6NL-204ENST00000606752 CPLX1O14810 134 aa25.27■■□□□ 1.64
USP6NL-204ENST00000606752 CDC42EP5Q6NZY7 148 aa25.27■■□□□ 1.64
USP6NL-204ENST00000606752 RAB11FIP4Q86YS3 637 aa25.27■■□□□ 1.64
USP6NL-204ENST00000606752 KLHL34Q8N239 644 aa25.27■■□□□ 1.64
USP6NL-204ENST00000606752 SERPINA10Q9UK55 444 aa25.27■■□□□ 1.64
USP6NL-204ENST00000606752 VPS37CA5D8V6 355 aaPredicted RBP25.26■■□□□ 1.63
USP6NL-204ENST00000606752 F13A1P00488 732 aa25.26■■□□□ 1.63
USP6NL-204ENST00000606752 DYNLL2Q96FJ2 89 aa25.26■■□□□ 1.63
USP6NL-204ENST00000606752 LAMB1P07942 1786 aa25.26■■□□□ 1.63
USP6NL-204ENST00000606752 WDHD1O75717 1129 aaPredicted RBP25.26■■□□□ 1.63
USP6NL-204ENST00000606752 MCTP1Q6DN14 999 aa25.26■■□□□ 1.63
USP6NL-204ENST00000606752 MICU3Q86XE3 530 aa25.26■■□□□ 1.63
USP6NL-204ENST00000606752 ZNF287Q9HBT7 754 aa25.26■■□□□ 1.63
USP6NL-204ENST00000606752 IARSP41252 1262 aaKnown RBP25.25■■□□□ 1.63
USP6NL-204ENST00000606752 RCAN1P53805 252 aa25.25■■□□□ 1.63
USP6NL-204ENST00000606752 ENAHQ8N8S7 591 aaPredicted RBP25.25■■□□□ 1.63
USP6NL-204ENST00000606752 MKNK2Q9HBH9 465 aa25.25■■□□□ 1.63
USP6NL-204ENST00000606752 ATP6V1DQ9Y5K8 247 aa25.25■■□□□ 1.63
USP6NL-204ENST00000606752 MYO3BQ8WXR4 1341 aa25.24■■□□□ 1.63
USP6NL-204ENST00000606752 TSPY2A6NKD2 308 aa25.24■■□□□ 1.63
USP6NL-204ENST00000606752 GOLGA8AA7E2F4 631 aa25.24■■□□□ 1.63
USP6NL-204ENST00000606752 VIL1P09327 827 aaKnown RBP25.23■■□□□ 1.63
USP6NL-204ENST00000606752 RXRAP19793 462 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 ADD1P35611 737 aaKnown RBP25.23■■□□□ 1.63
USP6NL-204ENST00000606752 FAM47AQ5JRC9 791 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 RSBN1LQ6PCB5 846 aaPredicted RBP25.23■■□□□ 1.63
USP6NL-204ENST00000606752 CPLX2Q6PUV4 134 aaKnown RBP25.23■■□□□ 1.63
USP6NL-204ENST00000606752 NIM1KQ8IY84 436 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 TAOK3Q9H2K8 898 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 ZNRF3Q9ULT6 936 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 NAV1Q8NEY1 1877 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 CDKL5O76039 1030 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 RBM5P52756 815 aaKnown RBP eCLIP25.23■■□□□ 1.63
USP6NL-204ENST00000606752 PICALMQ13492 652 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 IFIT1BQ5T764 474 aaKnown RBP25.23■■□□□ 1.63
USP6NL-204ENST00000606752 C16orf86Q6ZW13 317 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 MYL10Q9BUA6 226 aa25.23■■□□□ 1.63
USP6NL-204ENST00000606752 DDX4Q9NQI0 724 aaKnown RBP25.23■■□□□ 1.63
USP6NL-204ENST00000606752 RAD17O75943 681 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 FDPSP14324 419 aaKnown RBP25.22■■□□□ 1.63
USP6NL-204ENST00000606752 CDC27P30260 824 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 CDC37L1Q7L3B6 337 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 TTC6Q86TZ1 520 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 ZNF654Q8IZM8 581 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 ZNF444Q8N0Y2 327 aaPredicted RBP25.22■■□□□ 1.63
USP6NL-204ENST00000606752 FAM217BQ9NTX9 383 aaPredicted RBP25.22■■□□□ 1.63
USP6NL-204ENST00000606752 BCS1LQ9Y276 419 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 NID2Q14112 1375 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 CDK5RAP2Q96SN8 1893 aa25.22■■□□□ 1.63
USP6NL-204ENST00000606752 ZNF646O15015 1829 aaPredicted RBP25.21■■□□□ 1.63
USP6NL-204ENST00000606752 PSMD14O00487 310 aa25.21■■□□□ 1.63
USP6NL-204ENST00000606752 TFAP4Q01664 338 aa25.21■■□□□ 1.63
USP6NL-204ENST00000606752 GOLGB1Q14789 3259 aaKnown RBP25.21■■□□□ 1.63
USP6NL-204ENST00000606752 H3BQV1 296 aa25.21■■□□□ 1.63
USP6NL-204ENST00000606752 CDK8P49336 464 aa25.21■■□□□ 1.63
USP6NL-204ENST00000606752 IFFO2Q5TF58 517 aa25.21■■□□□ 1.63
USP6NL-204ENST00000606752 CCDC144CPQ8IYA2 1237 aa25.21■■□□□ 1.63
USP6NL-204ENST00000606752 CHAMP1Q96JM3 812 aa25.21■■□□□ 1.63
USP6NL-204ENST00000606752 ORC3Q9UBD5 711 aaPredicted RBP25.21■■□□□ 1.63
USP6NL-204ENST00000606752 TRAK2O60296 914 aa25.2■■□□□ 1.62
USP6NL-204ENST00000606752 PPP2R5BQ15173 497 aa25.2■■□□□ 1.62
USP6NL-204ENST00000606752 CCDC178Q5BJE1 867 aa25.2■■□□□ 1.62
USP6NL-204ENST00000606752 SLC44A5Q8NCS7 719 aa25.2■■□□□ 1.62
USP6NL-204ENST00000606752 OSBPL5Q9H0X9 879 aaPredicted RBP25.2■■□□□ 1.62
USP6NL-204ENST00000606752 BRCA1P38398 1863 aaKnown RBP25.19■■□□□ 1.62
USP6NL-204ENST00000606752 CCDC196A0A1B0GTZ2 297 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 PPFIA3O75145 1194 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 NTRK3Q16288 839 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 CATIPQ7Z7H3 387 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 FANCBQ8NB91 859 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 GMLQ99445 158 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 TCP11L1Q9NUJ3 509 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 PCDHAC2Q9Y5I4 1007 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 COL4A5P29400 1685 aa25.19■■□□□ 1.62
USP6NL-204ENST00000606752 NMT2O60551 498 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms