RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 USP5P45974 858 aa15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 SCYL3Q8IZE3 742 aa15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 LCORLQ8N3X6 602 aa15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 KBTBD3Q8NAB2 608 aa15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 DNAJC18Q9H819 358 aa15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 STAP2Q9UGK3 403 aa15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 AK9Q5TCS8 1911 aa15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 CCL15-CCL14A0A0B4J2E2 113 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 GLRX3O76003 335 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 ALDH1A1P00352 501 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 PTPRAP18433 802 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 CCL15Q16663 113 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 SLC4A8Q2Y0W8 1093 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 FOXP4Q8IVH2 680 aaPredicted RBP15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 CDK5RAP2Q96SN8 1893 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 ARMT1Q9H993 441 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 KCNH4Q9UQ05 1017 aa15.47■□□□□ 0.07
SHROOM1-207ENST00000606676 SIPA1L1O43166 1804 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 FOCADQ5VW36 1801 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 ERC2O15083 957 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 MBD4O95243 580 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 NUCB1Q02818 461 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 SNAPC2Q13487 334 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 B4GALNT3Q6L9W6 998 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 ZSCAN25Q6NSZ9 544 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 SDR42E1Q8WUS8 393 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 CRNKL1Q9BZJ0 848 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 LNPKQ9C0E8 428 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 PUS7LQ9H0K6 701 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 ZBTB47Q9UFB7 747 aaPredicted RBP15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 ZHX2Q9Y6X8 837 aa15.46■□□□□ 0.07
SHROOM1-207ENST00000606676 PRKAB2O43741 272 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 CETPP11597 493 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 CAP2P40123 477 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 PLCD1P51178 756 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 PDE1AP54750 535 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 JAG1P78504 1218 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 MOGSQ13724 837 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 NOM1Q5C9Z4 860 aaKnown RBP15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 CCDC84Q86UT8 332 aaPredicted RBP15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 TNS4Q8IZW8 715 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 DCP1AQ9NPI6 582 aaPredicted RBP15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 PICK1Q9NRD5 415 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 AFG3L2Q9Y4W6 797 aa15.45■□□□□ 0.06
SHROOM1-207ENST00000606676 BTBD19C9JJ37 291 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 GPR25O00155 361 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 CXCL11O14625 94 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 RNF113AO15541 343 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 HLA-DOAP06340 250 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 EVX2Q03828 476 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 CRHR2Q13324 411 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 OTUD7BQ6GQQ9 843 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 CHD1LQ86WJ1 897 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 CRACR2BQ8N4Y2 399 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 EHD4Q9H223 541 aa15.44■□□□□ 0.06
SHROOM1-207ENST00000606676 SHROOM1Q2M3G4 852 aaPredicted RBP15.43■□□□□ 0.06
SHROOM1-207ENST00000606676 ZNF296Q8WUU4 475 aaPredicted RBP15.43■□□□□ 0.06
SHROOM1-207ENST00000606676 OSBP2Q969R2 916 aa15.43■□□□□ 0.06
SHROOM1-207ENST00000606676 SERPINB13Q9UIV8 391 aa15.43■□□□□ 0.06
SHROOM1-207ENST00000606676 A0A0G2JLL6 359 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 GABPAQ06546 454 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 GPAT2Q6NUI2 795 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 TATDN1Q6P1N9 297 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 PRRT2Q7Z6L0 340 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 TTC6Q86TZ1 520 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 APPBP2Q92624 585 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 STRBPQ96SI9 672 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 ATP8A2Q9NTI2 1148 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 MCM9Q9NXL9 1143 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 DDX60LQ5H9U9 1706 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 CASP8AP2Q9UKL3 1982 aa15.42■□□□□ 0.06
SHROOM1-207ENST00000606676 POLR3DP05423 398 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 ZFYP08048 801 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 CYP2D6P10635 497 aa15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 ANKRD23Q86SG2 305 aa15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 TRIM34Q9BYJ4 488 aa15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 ZCCHC17Q9NP64 241 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 SLC4A4Q9Y6R1 1079 aa15.41■□□□□ 0.06
SHROOM1-207ENST00000606676 HTTP42858 3142 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 DOCK1Q14185 1865 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 TRIM75PA6NK02 468 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 SMIM22K7EJ46 135 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 M0R2C6 588 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 GDF11O95390 407 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 ASNSP08243 561 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 SHMT1P34896 483 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 TAF1CQ15572 869 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 SEC62Q99442 399 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 FSD1Q9BTV5 496 aa15.4■□□□□ 0.06
SHROOM1-207ENST00000606676 MYH1P12882 1939 aa15.39■□□□□ 0.05
SHROOM1-207ENST00000606676 MYH7P12883 1935 aa15.39■□□□□ 0.05
SHROOM1-207ENST00000606676 PHIPQ8WWQ0 1821 aa15.39■□□□□ 0.05
SHROOM1-207ENST00000606676 CYP2D7A0A087X1C5 515 aa15.39■□□□□ 0.05
SHROOM1-207ENST00000606676 USP17L5A8MUK1 530 aa15.39■□□□□ 0.05
SHROOM1-207ENST00000606676 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
SHROOM1-207ENST00000606676 USP17L12C9JPN9 530 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms