RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ZNF449Q6P9G9 518 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 FAM47EQ6ZV65 393 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 TMC4Q7Z404 712 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 ST7Q9NRC1 585 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 PRELID1Q9Y255 219 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 ZNF521Q96K83 1311 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.14□□□□□ -1.11
TUBE1-207ENST00000604689 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
TUBE1-207ENST00000604689 INMTO95050 263 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 CDC27P30260 824 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 PTGER2P43116 358 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 MCM2P49736 904 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 TTF1Q15361 905 aaPredicted RBP8.14□□□□□ -1.11
TUBE1-207ENST00000604689 TTC39AQ5SRH9 613 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 CCDC174Q6PII3 467 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 TMC6Q7Z403 805 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 COPRSQ9NQ92 184 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 SLC45A1Q9Y2W3 748 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 PREX1Q8TCU6 1659 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 C3orf80F5H4A9 247 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 SOX11P35716 441 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 RAB3GAP1Q15042 981 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 RRP12Q5JTH9 1297 aaKnown RBP8.14□□□□□ -1.11
TUBE1-207ENST00000604689 NANOGNBQ7Z5D8 188 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 LILRB2Q8N423 598 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 CCDC26Q8TAB7 109 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 KMT5AQ9NQR1 393 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 ZIM2Q9NZV7 527 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 CNPY2Q9Y2B0 182 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 MAGED1Q9Y5V3 778 aaPredicted RBP8.14□□□□□ -1.11
TUBE1-207ENST00000604689 CEP152O94986 1710 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 CGNL1Q0VF96 1302 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 RTEL1-TNFRSF6BF6WH68 1400 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 BAG4O95429 457 aaKnown RBP8.13□□□□□ -1.11
TUBE1-207ENST00000604689 TRPC1P48995 793 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 CCDC80Q76M96 950 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 SRLQ86TD4 932 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 DNAJC7Q99615 494 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 TEX13AQ9BXU3 409 aaPredicted RBP8.13□□□□□ -1.11
TUBE1-207ENST00000604689 SPG7Q9UQ90 795 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 DTNBO60941 627 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 MRPL28Q13084 256 aaKnown RBP8.13□□□□□ -1.11
TUBE1-207ENST00000604689 ANKS3Q6ZW76 656 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 TSEN2Q8NCE0 465 aaKnown RBP8.13□□□□□ -1.11
TUBE1-207ENST00000604689 BHMTQ93088 406 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 C8orf48Q96LL4 319 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 TCHPQ9BT92 498 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 RNF39Q9H2S5 420 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 ARNT2Q9HBZ2 717 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 COMMD8Q9NX08 183 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 ZKSCAN5Q9Y2L8 839 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 PCDHGA10Q9Y5H3 936 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 EHBP1L1Q8N3D4 1523 aa8.13□□□□□ -1.11
TUBE1-207ENST00000604689 RPSAP08865 295 aaKnown RBP8.12□□□□□ -1.11
TUBE1-207ENST00000604689 CYP11B2P19099 503 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 RAB27AP51159 221 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 RCN1Q15293 331 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 EMID1Q96A84 441 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-207ENST00000604689 DEPDC7Q96QD5 511 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 TTC12Q9H892 705 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-207ENST00000604689 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 NUP153P49790 1475 aaKnown RBP8.12□□□□□ -1.11
TUBE1-207ENST00000604689 MYO1CO00159 1063 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 KATNA1O75449 491 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 RBP3P10745 1247 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 PIK3CAP42336 1068 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
TUBE1-207ENST00000604689 KLHL10Q6JEL2 608 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 TIFAQ96CG3 184 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 TRIM17Q9Y577 477 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 ADGRL2O95490 1459 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 MTA2O94776 668 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 MASP1P48740 699 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 C11orf91Q3C1V1 193 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 ATCAYQ86WG3 371 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 SAMD3Q8N6K7 520 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 ZFPM2Q8WW38 1151 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
TUBE1-207ENST00000604689 SAMD9LQ8IVG5 1584 aa8.12□□□□□ -1.11
TUBE1-207ENST00000604689 TSPAN6O43657 245 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 ZNF24P17028 368 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 OAS2P29728 719 aaKnown RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 DDIT3P35638 169 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 DAB2P98082 770 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 NSUN2Q08J23 767 aaKnown RBP eCLIP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 CCSAPQ6IQ19 270 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 ANKRD18AQ8IVF6 992 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 CCDC191Q8NCU4 936 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 TNMDQ9H2S6 317 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 CDK13Q14004 1512 aaKnown RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 SUPT6HQ7KZ85 1726 aaKnown RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 PNMA6FA0A0J9YX94 578 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 ENPP3O14638 875 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 MSL3P1P0C860 447 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 SEC13P55735 322 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 SWI5Q1ZZU3 235 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms