RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PLIN4Q96Q06 1357 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CCDC196A0A1B0GTZ2 297 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 YDJCA8MPS7 323 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 GOLGA8BA8MQT2 603 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CALM1P0DP23 149 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CALM2P0DP24 149 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CALM3P0DP25 149 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SEC23AQ15436 765 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 C16orf86Q6ZW13 317 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TTC6Q86TZ1 520 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 NIM1KQ8IY84 436 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 LARGE2Q8N3Y3 721 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 NSUN7Q8NE18 718 aaKnown RBP14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ANKS1AQ92625 1134 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 FBXW7Q969H0 707 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 IDI2Q9BXS1 227 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 EHD4Q9H223 541 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SPON1Q9HCB6 807 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ZNRF3Q9ULT6 936 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 HPS5Q9UPZ3 1129 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ZDHHC9Q9Y397 364 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 MYH4Q9Y623 1939 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CCDC69A6NI79 296 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZBTB43O43298 467 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 DDAH1O94760 285 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZSCAN22P10073 491 aaPredicted RBP14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 APOBEC3HQ6NTF7 200 aaKnown RBP14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CHST3Q7LGC8 479 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 MTMR14Q8NCE2 650 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZSCAN10Q96SZ4 725 aaPredicted RBP14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 GMLQ99445 158 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 MAP3K14Q99558 947 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 LARP6Q9BRS8 491 aaKnown RBP14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 DHX36Q9H2U1 1008 aaKnown RBP14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 HDAC9Q9UKV0 1011 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 BRPF3Q9ULD4 1205 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 SLC12A7Q9Y666 1083 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 TNKSO95271 1327 aa14.39□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ATRNL1Q5VV63 1379 aa14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 WDHD1O75717 1129 aaPredicted RBP14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 POLR3DP05423 398 aaPredicted RBP14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 USP17L8P0C7I0 530 aa14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 STK3Q13188 491 aa14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 PKP1Q13835 747 aa14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 PPP4R3BQ5MIZ7 849 aa14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 DGKHQ86XP1 1220 aa14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 TOMM22Q9NS69 142 aa14.38□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CPLX1O14810 134 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 RANBP6O60518 1105 aaKnown RBP14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CTDNEP1O95476 244 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 F13A1P00488 732 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 RPS12P25398 132 aaKnown RBP14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 RRP12Q5JTH9 1297 aaKnown RBP14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 LARP1BQ659C4 914 aaKnown RBP14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 NFXL1Q6ZNB6 911 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 FAM184AQ8NB25 1140 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 OSBPL5Q9H0X9 879 aaPredicted RBP14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 USP40Q9NVE5 1235 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CYP2D7A0A087X1C5 515 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ENTPD3O75355 529 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 NOVP48745 357 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 GABPAQ06546 454 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 TNIP1Q15025 636 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 FKBP1CQ5VVH2 108 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 KIAA0825Q8IV33 1275 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ENAHQ8N8S7 591 aaPredicted RBP14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 JDP2Q8WYK2 163 aa14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZNF277Q9NRM2 450 aaPredicted RBP14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 RBM28Q9NW13 759 aaKnown RBP14.36□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 TSPY2A6NKD2 308 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 GOLGA8AA7E2F4 631 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 NFKBIEO00221 500 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 HLA-DOAP06340 250 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CYP2D6P10635 497 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 IFNAR1P17181 557 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 SCNN1DP51172 638 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CSPP1Q1MSJ5 1256 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 IFIT1BQ5T764 474 aaKnown RBP14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CATIPQ7Z7H3 387 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZNF444Q8N0Y2 327 aaPredicted RBP14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 OGFOD1Q8N543 542 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 WASF1Q92558 559 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ZSCAN16Q9H4T2 348 aaPredicted RBP14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 MKNK2Q9HBH9 465 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 INCENPQ9NQS7 918 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms