RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 NEDD4P46934 1319 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 LMNB1P20700 586 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 CXCL9Q07325 125 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 PDE4BQ07343 736 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 CUL4AQ13619 759 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 COL9A3Q14050 684 aaPredicted RBP14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 CHADLQ6NUI6 762 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 CDC42EP5Q6NZY7 148 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 ESR2Q92731 530 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 BRF1Q92994 677 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 TMEM87BQ96K49 555 aa14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 SAP30BPQ9UHR5 308 aaKnown RBP14.93□□□□□ -0.02
HERPUD2-207ENST00000603731 FLT1P17948 1338 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 MYH8P13535 1937 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 KDM4AO75164 1064 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 CYP2D6P10635 497 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 PICALMQ13492 652 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 SART3Q15020 963 aaKnown RBP14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 CFAP100Q494V2 611 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 C12orf60Q5U649 245 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 APOBEC3HQ6NTF7 200 aaKnown RBP14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 INTS4Q96HW7 963 aaKnown RBP14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 INCENPQ9NQS7 918 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 TPCN1Q9ULQ1 816 aa14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 NAP1L2Q9ULW6 460 aaPredicted RBP14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
HERPUD2-207ENST00000603731 ERICH2A1L162 156 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 POTEIP0CG38 1075 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 POTEJP0CG39 1038 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 ANTXR2P58335 489 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 DLGAP5Q15398 846 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 ME3Q16798 604 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 SLC4A8Q2Y0W8 1093 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 CYB5R4Q7L1T6 521 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 CCDC83Q8IWF9 413 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 CHMP4CQ96CF2 233 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 GMLQ99445 158 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 ZNF287Q9HBT7 754 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 TMOD2Q9NZR1 351 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 CHMP5Q9NZZ3 219 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 ZSWIM5Q9P217 1185 aa14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
HERPUD2-207ENST00000603731 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 RANBP6O60518 1105 aaKnown RBP14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 NT5C2P49902 561 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 APOBRQ0VD83 1088 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 STK3Q13188 491 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 TMEM67Q5HYA8 995 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 TTC6Q86TZ1 520 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 FBXL16Q8N461 479 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 MTA3Q9BTC8 594 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 MKNK2Q9HBH9 465 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 TACC3Q9Y6A5 838 aa14.9□□□□□ -0.02
HERPUD2-207ENST00000603731 ORC4O43929 436 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 WDHD1O75717 1129 aaPredicted RBP14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 LARGE1O95461 756 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 FGRP09769 529 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 RPS12P25398 132 aaKnown RBP14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 MMP14P50281 582 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 NFXL1Q6ZNB6 911 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 IQCA1Q86XH1 822 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 NECAB1Q8N987 351 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 ZNF274Q96GC6 653 aaPredicted RBP14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 UBAC1Q9BSL1 405 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 TDRD3Q9H7E2 651 aaKnown RBP14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 ANGEL1Q9UNK9 670 aaKnown RBP14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 SMC3Q9UQE7 1217 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 PASKQ96RG2 1323 aa14.89□□□□□ -0.03
HERPUD2-207ENST00000603731 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 KLF18A0A0U1RQI7 1052 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 CCDC69A6NI79 296 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 SMIM22K7EJ46 135 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 FZD9O00144 591 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 PRDM1O75626 825 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 PLCD1P51178 756 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 WTAPQ15007 396 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 SYNE3Q6ZMZ3 975 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 ZNF444Q8N0Y2 327 aaPredicted RBP14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 TMTC2Q8N394 836 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 DYNLL2Q96FJ2 89 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 OSBPL5Q9H0X9 879 aaPredicted RBP14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 PCDHAC2Q9Y5I4 1007 aa14.88□□□□□ -0.03
HERPUD2-207ENST00000603731 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 MYO1BO43795 1136 aa14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 IGDCC4Q8TDY8 1250 aa14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 PRMT6Q96LA8 375 aaPredicted RBP14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 ZKSCAN3Q9BRR0 538 aa14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 DDX4Q9NQI0 724 aaKnown RBP14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
HERPUD2-207ENST00000603731 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms