RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 LMBR1LQ6UX01 489 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 CABS1Q96KC9 395 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 NAP1L4Q99733 375 aaKnown RBP10.67□□□□□ -0.7
CSMD1-217ENST00000602723 CBX8Q9HC52 389 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 CASC4Q6P4E1 433 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 PEX26Q7Z412 305 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 MGARPQ8TDB4 240 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 STK38LQ9Y2H1 464 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 ZNF202O95125 648 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 CUTAO60888 179 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 LETM2Q2VYF4 491 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 NGLY1Q96IV0 654 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 TFCP2Q12800 502 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 TMCO4Q5TGY1 634 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 PSMB7Q99436 277 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 MAPK8IP1Q9UQF2 711 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 TBC1D8O95759 1140 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 STMN1P16949 149 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 SP4Q02446 784 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 TRIM68Q6AZZ1 485 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 KLHL7Q8IXQ5 586 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 CCDC105Q8IYK2 499 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 KIAA0586Q9BVV6 1533 aa10.67□□□□□ -0.7
CSMD1-217ENST00000602723 RNF168Q8IYW5 571 aaPredicted RBP10.67□□□□□ -0.7
CSMD1-217ENST00000602723 CEP104O60308 925 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 C8orf58Q8NAV2 365 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 ATP2A3Q93084 1043 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 RGS16O15492 202 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-217ENST00000602723 GABPAQ06546 454 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 HAUS3Q68CZ6 603 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 PKD2L1Q9P0L9 805 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 CHMP2AO43633 222 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 KRT15P19012 456 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 PDE4DQ08499 809 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 BEND3Q5T5X7 828 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 LGSNQ5TDP6 509 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 SFMBT2Q5VUG0 894 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 BICC1Q9H694 974 aaKnown RBP10.66□□□□□ -0.7
CSMD1-217ENST00000602723 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
CSMD1-217ENST00000602723 PARD3Q8TEW0 1356 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 ZFYVE9O95405 1425 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 LDHBP07195 334 aaKnown RBP10.66□□□□□ -0.7
CSMD1-217ENST00000602723 ZSCAN26Q16670 478 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 MAP3K21Q5TCX8 1036 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 PPP4R1Q8TF05 950 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 RAB17Q9H0T7 212 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 ANGEL1Q9UNK9 670 aaKnown RBP10.66□□□□□ -0.7
CSMD1-217ENST00000602723 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 CUL4BQ13620 913 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 POSTNQ15063 836 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 PRR16Q569H4 304 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 VEZTQ9HBM0 779 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 MAP3K5Q99683 1374 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 DAPK3O43293 454 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 CPA1P15085 419 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 CNGA1P29973 690 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 MTX1Q13505 466 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 PPP2R5DQ14738 602 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 RPS6KA1Q15418 735 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 MICAL1Q8TDZ2 1067 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 NELFBQ8WX92 580 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 BCAP29Q9UHQ4 241 aa10.66□□□□□ -0.7
CSMD1-217ENST00000602723 VGLL3A8MV65 326 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 NLRP12P59046 1061 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
CSMD1-217ENST00000602723 DDX21Q9NR30 783 aaKnown RBP eCLIP10.65□□□□□ -0.7
CSMD1-217ENST00000602723 DEXIO95424 95 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 DCUN1D2Q6PH85 259 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 CTTNBP2NLQ9P2B4 639 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 SIRT1Q96EB6 747 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 RRAGDQ9NQL2 400 aaPredicted RBP10.65□□□□□ -0.7
CSMD1-217ENST00000602723 RNF34Q969K3 372 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 RIPOR2Q9Y4F9 1068 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 PPFIA4O75335 1185 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.7
CSMD1-217ENST00000602723 RILPQ96NA2 401 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 CD109Q6YHK3 1445 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 AOX1Q06278 1338 aa10.65□□□□□ -0.7
CSMD1-217ENST00000602723 GCKP35557 465 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 EXOC7Q9UPT5 735 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 CCDC169A6NNP5 214 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 ANKRD20A3Q5VUR7 823 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 RPGRIP1Q96KN7 1286 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 NLRP3Q96P20 1036 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 TACO1Q9BSH4 297 aaKnown RBP10.65□□□□□ -0.71
CSMD1-217ENST00000602723 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.71
CSMD1-217ENST00000602723 HELLSQ9NRZ9 838 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 CAPN7Q9Y6W3 813 aa10.65□□□□□ -0.71
CSMD1-217ENST00000602723 SH3BGRP55822 239 aaPredicted RBP10.64□□□□□ -0.71
CSMD1-217ENST00000602723 ZNF445P59923 1031 aa10.64□□□□□ -0.71
CSMD1-217ENST00000602723 LINS1Q8NG48 757 aa10.64□□□□□ -0.71
CSMD1-217ENST00000602723 NYXQ9GZU5 481 aa10.64□□□□□ -0.71
CSMD1-217ENST00000602723 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
CSMD1-217ENST00000602723 NFE2L3Q9Y4A8 694 aa10.64□□□□□ -0.71
CSMD1-217ENST00000602723 NUMA1Q14980 2115 aa10.64□□□□□ -0.71
CSMD1-217ENST00000602723 GUCY2FP51841 1108 aa10.64□□□□□ -0.71
CSMD1-217ENST00000602723 SESN3P58005 492 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms